GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 851 - 875 of 1070 in total
Pathway Name ▼ Protein Name UniProt ID Gene Symbol Organism GlyTouCan ID
DDX58/IFIH1-mediated induction of interferon-alpha/beta
  • Hsp84
  • Hsp86
  • Hsp90aa1
  • Hsp90ab1
  • Hspc3
  • Hspca
  • Hspcb
  • Ips1
  • Irf3
  • Mavs
  • Tbk1
  • Tomm70
  • Tomm70a
  • Visa
Rattus norvegicus (Norway rat)
DCC mediated attractive signaling
  • Cdc42
  • Dcc
  • Fak
  • Fak1
  • Fyn
  • Nck1
  • Ptk2
  • Rac
  • Rac1
  • Src
  • Trio
Rattus norvegicus (Norway rat)
DARPP-32 events
  • Cdk5
  • Cdkn5
  • Dpde1
  • PSSALRE
  • Pde4a
  • Pde4b
  • Pde4c
  • Pde4d
  • Pkacb
  • Ppp1a
  • Ppp1ca
  • Ppp1r1b
  • Ppp2ca
  • Ppp2cb
  • Ppp2r1a
  • Ppp2r1b
  • Ppp2r5d
  • Prkaca
  • Prkacb
  • Prkar1a
  • Prkar1b
  • Prkar2a
  • Prkar2b
Rattus norvegicus (Norway rat)
DAP12 signaling
  • Ash
  • B2m
  • Btk
  • Cd94
  • Dap12
  • Fyn
  • Grap2
  • Grb2
  • Hras
  • Hras1
  • Klrc1
  • Klrd1
  • Klrk1
  • Kras
  • Kras2
  • Lat
  • Lck
  • Lcp2
  • Nkg2d
  • Nkrp2
  • Nras
  • Pik3ca
  • Pik3cb
  • Pik3r1
  • Pik3r2
  • Plcg1
  • Plcg2
  • Rac
  • Rac1
  • Shc1
  • Sos1
  • Syk
  • Trem2
  • Tyrobp
  • Vav2
  • Vav3
Rattus norvegicus (Norway rat)
DAP12 interactions
  • 1700031A10Rik
  • 2781a1
  • 2788a1a2
  • 2795a1
  • 2800a1a2
  • 2812a1a2
  • 2824a1
  • 2829a1a2
  • 2846a1a2
  • 2860a1
  • 2865a2
  • 2869a1a2
  • 2879a1
  • 2886a1-a1a2
  • 2901a1a2
  • 2906a1
  • 2920a1a2
  • 2927a1
  • 2941a1a2
  • 2945a1a2
  • 2950a1
  • 2953a1a2
  • 2959a1
  • 2976a1
  • 2981a1a2
  • 2984a1a2
  • 2994a1
  • 3082ex4-5
  • 3252a3
  • 3258a2
  • 3281a3
  • 3298a3
  • AABR07044308.2
  • AABR07044362.1
  • AABR07072807.1
  • AC120486.1
  • B2m
  • Cd300e
  • Cd300lb
  • Cd94
  • Clec5a
  • Dap12
  • ENSRNOG00000064836
  • ENSRNOG00000069480
  • H2-M10.6
  • H2-M10.6l
  • Kir3dl1
  • Klrc1
  • Klrd1
  • LOC102546590
  • LOC120093125
  • Nerg-ps11
  • Nerg-ps12
  • Nerg-ps13
  • Nerg-ps14
  • Nerg-ps15
  • Pbp-ps
  • Ppid-ps
  • Ppp1cb-ps
  • RT1-A1
  • RT1-A2
  • RT1-CE1
  • RT1-CE11
  • RT1-CE14
  • RT1-CE16
  • RT1-CE2
  • RT1-M1-1
  • RT1-M1-2
  • RT1-M1-3
  • RT1-M1-4
  • RT1-M1-5
  • RT1-M10-1
  • RT1-M10-2
  • RT1-M10-3
  • RT1-M10-4
  • RT1-M2
  • RT1-M3-1
  • RT1-M5
  • RT1-M7
  • RT1-M8
  • RT1-N3
  • RT1-O1l1
  • RT1-P2
  • RT1-S3
  • Rcrg1-ps25
  • Rcrg1-ps26
  • Rcrg1-ps27
  • Rcrg1-ps28
  • Rcrg1-ps29
  • Rcrg1-ps30
  • Rcrg1-ps31
  • Rcrg1-ps32
  • Rcrg1-ps33
  • Rcrg1-ps34
  • Rcrg1-ps35
  • Rcrg1-ps36
  • Rcrg1-ps37
  • Rcrg1-ps38
  • Rcrg1-ps39
  • Rcrg1-ps40
  • Rpl39-ps
  • Siglec10
  • Siglec15
  • Sirpal1
  • Sirpd
  • Trem1
  • Trem2
  • Trim15
  • Trim31
  • Trim39-ps
  • Tyrobp
Rattus norvegicus (Norway rat)
DAG and IP3 signaling
  • Pkcd
  • Pkce
  • Prkcd
  • Prkce
Rattus norvegicus (Norway rat)
Cytosolic sulfonation of small molecules
  • Abhd14b
  • Bpnt1
  • Bpnt2
  • Impa3
  • Impad1
  • Podxl2
  • Sal3
  • Smp2a
  • St1a1
  • St1b1
  • St2a1
  • St2a2
  • Sult1a1
  • Sult1b1
  • Sult1c2
  • Sult2a1
  • Sult2a2
  • Sult2a6
  • Sult2b1
  • Sult4a1
  • Sult6b1
  • Sultk1
  • Sultx3
  • Tpst1
  • Tpst2
Rattus norvegicus (Norway rat)
Cytosolic sensors of pathogen-associated DNA
  • Aim2
  • Mre11
  • Mre11a
Rattus norvegicus (Norway rat)
Cytoprotection by HMOX1
  • AC128290.1
  • Abcc1
  • Alb
  • Blvr
  • Blvra
  • COX2
  • Carm1
  • Cbp
  • Ccdc44
  • Chd9
  • Coi
  • Coii
  • Coiii
  • Cox11
  • Cox14
  • Cox16
  • Cox18
  • Cox4
  • Cox4a
  • Cox4i1
  • Cox5a
  • Cox5b
  • Cox6a1
  • Cox6al
  • Cox6b1
  • Cox6c
  • Cox6c2
  • Cox7a2l
  • Cox7b
  • Cox7c
  • Cox7c1
  • Cox8
  • Cox8a
  • Cox8l
  • Crebbp
  • Cycs
  • Cycsl2
  • Cycsl3
  • ENSRNOG00000064875
  • Fabp1
  • Hba-a1
  • Hba1
  • Hbb
  • Hdac3
  • Hmox1
  • Hmox2
  • LOC120096563
  • LOC690675
  • Lrp157
  • Lrpprc
  • Med1
  • Mrp1
  • Mt-co1
  • Mt-co2
  • Mt-co3
  • Mtco1
  • Mtco2
  • Mtco3
  • Ncoa1
  • Ncoa2
  • Ncoa6ip
  • Ncor2
  • Nr1c1
  • Nr2b1
  • Pimt
  • Ppar
  • Ppara
  • Prmt4
  • RGD1562558
  • Rxra
  • Sco1
  • Sin3a
  • Sin3b
  • Smarcd3
  • Surf-1
  • Surf1
  • Taco1
  • Tbl1x
  • Tbl1xr1
  • Tgs1
  • Tif2
  • Tymp
Rattus norvegicus (Norway rat)
Cyclin E associated events during G1/S transition
  • Akt1
  • Akt2
  • Akt3
  • Cables1
  • Cak
  • Cak1
  • Ccne
  • Ccne1
  • Ccne2
  • Ccnh
  • Cdc25a
  • Cdk2
  • Cdk7
  • Cdkn1a
  • Cdkn1b
  • Cdkn2
  • Mnat1
  • Mo15
  • Rb-1
  • Rb1
  • Wee1
  • p27Kip1
Rattus norvegicus (Norway rat)
Cyclin D associated events in G1
  • Abl1
  • Cak
  • Cak1
  • Ccnd1
  • Ccnd2
  • Ccnd3
  • Ccne
  • Ccne1
  • Ccne2
  • Ccnh
  • Cdk2
  • Cdk4
  • Cdk6
  • Cdk7
  • Cdkn1a
  • Cdkn1b
  • Cdkn1c
  • Cdkn2
  • Cdkn2b
  • Cdkn2d
  • Cks1b
  • Cks1l
  • Cul1
  • E2f1
  • E2f2
  • E2f3
  • E2f4
  • E2f5
  • Ink4
  • Jak2
  • LOC100360645
  • LOC682033
  • LOC684111
  • Lyn
  • MGC112830
  • Mnat1
  • Mo15
  • Ppp2ca
  • Ppp2cb
  • Ppp2r1a
  • Ppp2r1b
  • Ppp2r2a
  • Ppp2r3b
  • Ptk6
  • RGD1561797
  • Rb-1
  • Rb1
  • Rbl1
  • Rbl2
  • Rps27a
  • Skp1
  • Skp1a
  • Skp2
  • Src
  • Tfdp1
  • Tfdp2
  • Uba80
  • Ubb
  • Ubbl1
  • Ubc
  • Ubcep1
  • Ubcl1
  • Vin-1
  • p27Kip1
Rattus norvegicus (Norway rat)
Cyclin A:Cdk2-associated events at S phase entry
  • Akt1
  • Akt2
  • Akt3
  • Cables1
  • Cak
  • Cak1
  • Ccna1
  • Ccna2
  • Ccnh
  • Cdc25a
  • Cdc25b
  • Cdk2
  • Cdk7
  • Cdkn1a
  • Cdkn1b
  • Cdkn2
  • Fzr1
  • Mnat1
  • Mo15
  • Rb-1
  • Rb1
  • Wee1
  • p27Kip1
Rattus norvegicus (Norway rat)
Crosslinking of collagen fibrils
  • Bmp1
  • Lox
  • Loxl1
  • Loxl2
  • Loxl3
  • Loxl4
  • Pcolce
  • Pcpe1
  • Pxdn
  • Tll1
  • Tll2
Rattus norvegicus (Norway rat)
Cross-presentation of soluble exogenous antigens (endosomes)
  • Cd207
  • Endo180
  • Fcgr1a
  • LOC100360846
  • LOC100365869
  • Lmp10
  • Lmp2
  • Mecl1
  • Mrc1
  • Mrc2
  • Mss1
  • Psma1
  • Psma2
  • Psma3
  • Psma4
  • Psma5
  • Psma6
  • Psma7
  • Psma8
  • Psmb1
  • Psmb10
  • Psmb2
  • Psmb3
  • Psmb4
  • Psmb5
  • Psmb6
  • Psmb6l
  • Psmb6l1
  • Psmb7
  • Psmb8
  • Psmb9
  • Psmc1
  • Psmc2
  • Psmc3
  • Psmc4
  • Psmc5
  • Psmc6
  • Psmd1
  • Psmd10
  • Psmd11
  • Psmd12
  • Psmd13
  • Psmd14
  • Psmd2
  • Psmd3
  • Psmd5
  • Psmd6
  • Psmd7
  • Psmd8
  • Psmd9
  • Psme1
  • Psme2
  • Psme4
  • Psmf1
  • Ring12
  • Sug1
  • Tbp1
  • Tbp7
Rattus norvegicus (Norway rat)
Cross-presentation of particulate exogenous antigens (phagosomes)
  • Cd36
  • Cyba
  • Cybb
  • Fat
  • Itgav
  • Itgb5
  • Ncf1
  • Ncf2
  • Ncf4
Rattus norvegicus (Norway rat)
Cristae formation
  • Atp5a1
  • Atp5b
  • Atp5c
  • Atp5c1
  • Atp5d
  • Atp5e
  • Atp5f
  • Atp5f1
  • Atp5f1a
  • Atp5f1b
  • Atp5f1c
  • Atp5f1d
  • Atp5f1e
  • Atp5g1
  • Atp5g2
  • Atp5g3
  • Atp5h
  • Atp5i
  • Atp5j
  • Atp5j2
  • Atp5jd
  • Atp5l
  • Atp5mc1
  • Atp5mc2
  • Atp5mc3
  • Atp5me
  • Atp5mf
  • Atp5mg
  • Atp5o
  • Atp5pb
  • Atp5pd
  • Atp5pf
  • Atp5po
  • Atp5s
  • Atp6
  • Atp8
  • Atpase6
  • Atpase8
  • Dmac2l
  • Mt-atp6
  • Mt-atp8
  • Mtatp6
  • Mtatp8
Rattus norvegicus (Norway rat)
Creatine metabolism
  • Agat
  • Ckb
  • Ckbb
  • Ckm
  • Ckmm
  • Ckmt
  • Ckmt1
  • Ckmt2
  • Gabt3
  • Gamt
  • Gat-3
  • Gat-b
  • Gatm
  • Prot
  • Slc6a11
  • Slc6a12
  • Slc6a7
  • Slc6a8
Rattus norvegicus (Norway rat)
Costimulation by the CD28 family
  • Ailim
  • Ash
  • Btla
  • Grb2
  • Icos
  • Icoslg
  • Pik3ca
  • Pik3r1
  • Pik3r2
  • Pik3r3
  • Ptph6
  • Ptpn11
  • Ptpn6
  • Tnfrsf14
Rattus norvegicus (Norway rat)
Cooperation of PDCL (PhLP1) and TRiC/CCT in G-protein beta folding
  • Cct1
  • Cct2
  • Cct3
  • Cct4
  • Cct5
  • Cct6a
  • Cct6b
  • Cct7
  • Cct8
  • Ccta
  • Cctb
  • Ck2n
  • Csnk2a1
  • Csnk2a2
  • Csnk2b
  • Gnb1
  • Gnb2
  • Gnb3
  • Gnb4
  • Gnb5
  • LOC363658
  • Pdcl
  • Rgs7
  • Rgs9
  • Tcp1
Rattus norvegicus (Norway rat)
Conversion from APC/C:Cdc20 to APC/C:Cdh1 in late anaphase
  • Anapc1
  • Anapc15
  • Anapc16
  • Anapc2
  • Anapc4
  • Anapc5
  • Anapc7
  • Cdc14a
  • Cdc16
  • Cdc20
  • Cdc23
  • Cdc26
  • Cdc27
  • Fzr1
  • LOC100366017
  • Ube2c
  • Ube2d1
  • Ube2e1
  • Ube2s
Rattus norvegicus (Norway rat)
Condensation of Prophase Chromosomes
  • Ccnb1
  • Cdc2
  • Cdc2a
  • Cdk1
  • Cdkn1
  • ENSRNOG00000062927
  • ENSRNOG00000064540
  • ENSRNOG00000066901
  • ENSRNOG00000068034
  • H2ab3
  • H2ac10
  • H2ac18
  • H2ac4
  • H2afb3
  • H2afx
  • H2aj
  • H2ax
  • H2az2
  • H2bc1
  • H2bc12l1
  • H2bc6
  • H2bcl1
  • H2bcl2
  • H2bu1
  • H4c16
  • H4c2
  • H4f16
  • H4ft
  • Hist1h2ba
  • Hist1h2bc
  • Hist1h2bg
  • Hist1h2bo
  • Hist1h2bq
  • Hist1h4b
  • Hist1h4m
  • Hist2h2aa3
  • Hist4
  • Hist4h4
  • Kmt5a
  • LOC100365043
  • LOC100910200
  • LOC120097726
  • LOC684797
  • Mcph1
  • Ncapd3
  • Ncapg2
  • Ncaph2
  • Phf8
  • Plk
  • Plk1
  • Rb-1
  • Rb1
  • Set
  • Smc2
  • Smc4
  • Th2b
Rattus norvegicus (Norway rat)
Condensation of Prometaphase Chromosomes
  • Ck2n
  • Csnk2a1
  • Csnk2a2
  • Csnk2b
  • Ncapd2
  • Ncapg
  • Ncaph
  • Smc2
  • Smc4
Rattus norvegicus (Norway rat)
Complex I biogenesis
  • AABR07056686.1
  • Acad9
  • Ecsit
  • Hrpap20
  • Ip13
  • LOC100363268
  • LOC100911483
  • LOC103691107
  • LOC120101567
  • LOC684509
  • Mt-nd1
  • Mt-nd2
  • Mt-nd3
  • Mt-nd4
  • Mt-nd5
  • Mt-nd6
  • Mtnd1
  • Mtnd4
  • Mtnd5
  • Mtnd6
  • Nd1
  • Nd2
  • Nd3
  • Nd4
  • Nd5
  • Nd6
  • Ndufa10
  • Ndufa11
  • Ndufa12
  • Ndufa13
  • Ndufa2
  • Ndufa3-ps3
  • Ndufa5
  • Ndufa6
  • Ndufa8
  • Ndufa9
  • Ndufab1
  • Ndufaf1
  • Ndufaf2
  • Ndufaf3
  • Ndufaf4
  • Ndufaf5
  • Ndufaf6
  • Ndufaf7
  • Ndufb10
  • Ndufb11
  • Ndufb2
  • Ndufb3
  • Ndufb4l5
  • Ndufb5
  • Ndufb6
  • Ndufb7
  • Ndufb8
  • Ndufc1
  • Ndufs1
  • Ndufs2
  • Ndufs3
  • Ndufs4
  • Ndufs5
  • Ndufs5-ps2
  • Ndufs6
  • Ndufs7
  • Ndufs8
  • Ndufv1
  • Ndufv2
  • Ndufv3
  • Nubpl
  • Timmdc1
  • Tmem126b
  • Tmem186
Rattus norvegicus (Norway rat)
Common Pathway of Fibrin Clot Formation
  • Cd177
  • Cxcl4
  • F10
  • F13a
  • F13a1
  • F13b
  • F2
  • F2r
  • F8
  • Fga
  • Fgb
  • Fgg
  • Hcf2
  • Par1
  • Pf4
  • Pi7
  • Pn1
  • Proc
  • Procr
  • Pros
  • Pros1
  • Prtn3
  • Scyb4
  • Serpina5
  • Serpinc1
  • Serpind1
  • Serpine2
  • Thbd
Rattus norvegicus (Norway rat)
Collagen degradation
  • Col13a1
  • Col15a1
  • Col18a1
  • Col19a1
  • Col25a1
  • Col26a1
  • Cts7l2
  • Ctsb
  • Ctsd
  • Ctsk
  • Ctsll3
  • Fur
  • Furin
  • LOC100365995
  • LOC100909752
  • LOC103690164
  • LOC687064
  • Mmel
  • Mmp-7
  • Mmp1
  • Mmp10
  • Mmp12
  • Mmp13
  • Mmp14
  • Mmp15
  • Mmp1a
  • Mmp2
  • Mmp20
  • Mmp3
  • Mmp7
  • Mmp8
  • Mmp9
  • Mtmmp
  • Pcsk3
  • Phykpl
  • Prss3
  • RGD1308751
  • Tmprss6
  • Try4
  • Try5
Rattus norvegicus (Norway rat)

About Release Notes Help Feedback

International Collaboration

GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01


Logo License Policies Site Map

Contact: support@glycosmos.org

This work is licensed under Creative Commons Attribution 4.0 International


GlyCosmos Portal v4.0.0

Last updated: August 19, 2024