GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 1026 - 1050 of 1070 in total
Pathway Name Protein Name UniProt ID Gene Symbol Organism GlyTouCan ID ▲
FCERI mediated NF-kB activation
  • AABR07034730.2
  • AABR07060971.1
  • AABR07061001.1
  • AABR07065782.1
  • AABR07065808.1
  • AABR07065812.2
  • AABR07065813.1
  • Bcl10
  • Card11
  • Chuk
  • ENSRNOG00000062324
  • ENSRNOG00000062682
  • ENSRNOG00000062762
  • ENSRNOG00000062853
  • ENSRNOG00000062915
  • ENSRNOG00000062976
  • ENSRNOG00000063148
  • ENSRNOG00000063329
  • ENSRNOG00000063340
  • ENSRNOG00000063341
  • ENSRNOG00000063422
  • ENSRNOG00000063550
  • ENSRNOG00000063572
  • ENSRNOG00000063707
  • ENSRNOG00000063791
  • ENSRNOG00000064041
  • ENSRNOG00000064061
  • ENSRNOG00000064085
  • ENSRNOG00000064245
  • ENSRNOG00000064481
  • ENSRNOG00000064582
  • ENSRNOG00000065160
  • ENSRNOG00000065181
  • ENSRNOG00000065191
  • ENSRNOG00000065237
  • ENSRNOG00000065406
  • ENSRNOG00000065564
  • ENSRNOG00000065629
  • ENSRNOG00000065670
  • ENSRNOG00000065675
  • ENSRNOG00000065690
  • ENSRNOG00000065855
  • ENSRNOG00000066010
  • ENSRNOG00000066072
  • ENSRNOG00000066203
  • ENSRNOG00000066380
  • ENSRNOG00000066406
  • ENSRNOG00000066431
  • ENSRNOG00000066785
  • ENSRNOG00000066812
  • ENSRNOG00000066814
  • ENSRNOG00000066904
  • ENSRNOG00000066922
  • ENSRNOG00000066926
  • ENSRNOG00000066971
  • ENSRNOG00000067010
  • ENSRNOG00000067025
  • ENSRNOG00000067233
  • ENSRNOG00000067273
  • ENSRNOG00000067516
  • ENSRNOG00000067603
  • ENSRNOG00000067643
  • ENSRNOG00000067679
  • ENSRNOG00000067883
  • ENSRNOG00000068055
  • ENSRNOG00000068059
  • ENSRNOG00000068381
  • ENSRNOG00000068499
  • ENSRNOG00000068847
  • ENSRNOG00000069193
  • ENSRNOG00000069427
  • ENSRNOG00000069491
  • ENSRNOG00000069766
  • ENSRNOG00000069828
  • ENSRNOG00000069901
  • ENSRNOG00000069940
  • ENSRNOG00000070091
  • ENSRNOG00000070192
  • ENSRNOG00000070244
  • ENSRNOG00000070247
  • ENSRNOG00000070810
  • ENSRNOG00000070812
  • ENSRNOG00000070816
  • ENSRNOG00000070832
  • ENSRNOG00000070933
  • ENSRNOG00000070986
  • ENSRNOG00000071049
  • ENSRNOG00000071091
  • Igkv2-112l1
  • Igkv8-30l1
  • Igkvl-ps6
  • Igkvl10
  • Igkvl12
  • Igkvl13
  • Igkvl2
  • Iglc1
  • Igll1
  • Ikbkb
  • Ikbkg
  • Ikkb
  • LOC100363522
  • LOC100365500
  • LOC100911032
  • LOC102551948
  • LOC690813
  • Lyn
  • Malt1
  • Map3k7
  • Map3k7ip2
  • Nemo
  • Pkcq
  • Prkcq
  • RGD1561722
  • RGD1564696
  • Tab1
  • Tab2
  • Tab3
  • Traf6
Rattus norvegicus (Norway rat)
PRC2 methylates histones and DNA
  • Aebp2
  • Dnmt1
  • Dnmt3a
  • Dnmt3b
  • ENSRNOG00000062927
  • ENSRNOG00000064540
  • ENSRNOG00000066901
  • ENSRNOG00000068034
  • Eed
  • Ezh2
  • H2ab3
  • H2ac10
  • H2ac18
  • H2ac4
  • H2afb3
  • H2afx
  • H2aj
  • H2ax
  • H2az2
  • H2bc1
  • H2bc12l1
  • H2bc6
  • H2bcl1
  • H2bcl2
  • H2bu1
  • H3-3b
  • H3.3b
  • H3c13
  • H3f3b
  • H4c16
  • H4c2
  • H4f16
  • H4ft
  • Hist1h2ba
  • Hist1h2bc
  • Hist1h2bg
  • Hist1h2bo
  • Hist1h2bq
  • Hist1h4b
  • Hist1h4m
  • Hist2h2aa3
  • Hist2h3c2
  • Hist4
  • Hist4h4
  • Jarid2
  • LOC100365043
  • LOC100910200
  • LOC120097726
  • LOC681740
  • LOC684797
  • Mtf2
  • Phf1
  • Phf19
  • Rbbp4
  • Rbbp7
  • Suz12
  • Th2b
Rattus norvegicus (Norway rat)
Regulation of TBK1, IKKε (IKBKE)-mediated activation of IRF3, IRF7
  • Cd14
  • Ikbke
  • LOC100360645
  • Ly96
  • Optn
  • Plin3
  • Rps27a
  • Tank
  • Tbk1
  • Ticam1
  • Ticam2
  • Tlr4
  • Traf3
  • Uba80
  • Ubb
  • Ubbl1
  • Ubc
  • Ubcep1
  • Ubcl1
Rattus norvegicus (Norway rat)
MET activates PTPN11
  • Ash
  • Gab1
  • Grb2
  • Hgf
  • Met
  • Ptpn11
Rattus norvegicus (Norway rat)
Assembly of the ORC complex at the origin of replication
  • ENSRNOG00000062927
  • ENSRNOG00000064540
  • ENSRNOG00000066901
  • ENSRNOG00000068034
  • H2ab3
  • H2ac10
  • H2ac18
  • H2ac4
  • H2afb3
  • H2afx
  • H2aj
  • H2ax
  • H2az2
  • H2bc1
  • H2bc12l1
  • H2bc6
  • H2bcl1
  • H2bcl2
  • H2bu1
  • H3-3b
  • H3.3b
  • H3c13
  • H3f3b
  • H4c16
  • H4c2
  • H4f16
  • H4ft
  • Hist1h2ba
  • Hist1h2bc
  • Hist1h2bg
  • Hist1h2bo
  • Hist1h2bq
  • Hist1h4b
  • Hist1h4m
  • Hist2h2aa3
  • Hist2h3c2
  • Hist4
  • Hist4h4
  • Kpna1
  • Kpna6
  • Kpnb1
  • LOC100365043
  • LOC100910200
  • LOC120097726
  • LOC684797
  • Orc1
  • Orc1l
  • Orc2
  • Orc2l
  • Orc3
  • Orc3l
  • Orc4
  • Orc4l
  • Orc5
  • Orc6
  • Th2b
Rattus norvegicus (Norway rat)
HSF1-dependent transactivation
  • Akt1s1
  • Camk2a
  • Camk2b
  • Camk2d
  • Camk2g
  • Cryab
  • Cryac
  • Dnajb1
  • Frap1
  • Gbl
  • Hsbp1
  • Hsc70
  • Hsc73
  • Hsf1
  • Hsp22
  • Hsp70-1
  • Hsp70-2
  • Hsp70-3
  • Hsp84
  • Hsp86
  • Hsp90aa1
  • Hsp90ab1
  • Hspa1
  • Hspa1a
  • Hspa1b
  • Hspa1l
  • Hspa2
  • Hspa8
  • Hspb8
  • Hspc3
  • Hspca
  • Hspcb
  • Lst8
  • Mlst8
  • Mtor
  • Raft1
  • Rptor
Rattus norvegicus (Norway rat)
CRMPs in Sema3A signaling
  • Cdk5
  • Cdk5r
  • Cdk5r1
  • Cdkn5
  • Crmp1
  • Crmp3
  • Crmp4
  • Dpysl1
  • Dpysl2
  • Dpysl3
  • Dpysl4
  • Dpysl5
  • Fes
  • Fyn
  • Gsk3b
  • Nrp1
  • PSSALRE
  • Plxna1
  • Plxna2
  • Plxna3
  • Plxna4
  • Plxna4a
  • Sema3a
  • Ulip4
  • Ulip6
Rattus norvegicus (Norway rat)
Interleukin receptor SHC signaling
  • Ash
  • Csf2
  • Csf2rb
  • Csfgm
  • Gab2
  • Grb2
  • Il-2
  • Il-3
  • Il-5
  • Il2
  • Il2ra
  • Il2rb
  • Il3
  • Il3ra
  • Il5
  • Inpp5d
  • Inppl1
  • Jak1
  • Jak2
  • Jak3
  • Pik3ca
  • Pik3cb
  • Pik3cd
  • Pik3r1
  • Pik3r2
  • Pik3r3
  • Ptph6
  • Ptpn6
  • Shc1
  • Ship
  • Ship1
  • Ship2
  • Sos1
Rattus norvegicus (Norway rat)
RHO GTPases Activate NADPH Oxidases
  • Csbp1
  • Csbp2
  • Cyba
  • Cybb
  • Erk1
  • Erk2
  • Mapk
  • Mapk1
  • Mapk11
  • Mapk14
  • Mapk3
  • Mox1
  • Mrp14
  • Mrp8
  • Ncf1
  • Ncf2
  • Ncf4
  • Noh1
  • Nox1
  • Nox3
  • Noxa1
  • Noxo1
  • Pik3c3
  • Pik3r4
  • Pin1
  • Pkca
  • Pkcb
  • Pkcd
  • Pkcz
  • Prkca
  • Prkcb
  • Prkcb1
  • Prkcd
  • Prkcz
  • Prkm1
  • Prkm3
  • Rac
  • Rac1
  • Rac2
  • S100a8
  • S100a9
  • Vps34
Rattus norvegicus (Norway rat)
Tetrahydrobiopterin (BH4) synthesis, recycling, salvage and regulation
  • Akt1
  • CaMIII
  • Calm3
  • Cam3
  • Camc
  • Gch
  • Gch1
  • Gchfr
  • Gfrp
  • Hsp86
  • Hsp90aa1
  • Hspca
  • Nos3
  • Prkg2
  • Pts
  • Spr
Rattus norvegicus (Norway rat)
Lysosomal oligosaccharide catabolism
  • Man2b1
  • Man2b2
  • Man2c1
  • Manba
  • Mrfap1
Rattus norvegicus (Norway rat)
HS-GAG degradation
  • Agrin
  • Agrn
  • Glb1
  • Glb1l
  • Glb1l2
  • Glb1l3
  • Gpc1
  • Gpc2
  • Gpc3
  • Gpc4
  • Gpc5
  • Gpc6
  • Gus
  • Gusb
  • Hep
  • Hpse
  • Hpse2
  • Hspg1
  • Ids
  • Idua
  • LOC100363795
  • Naglu
  • Sdc1
  • Sdc2
  • Sdc3
  • Sdc4
  • Sgsh
  • Synd1
  • Synd2
  • Synd3
  • Synd4
Rattus norvegicus (Norway rat)
N-glycan trimming in the ER and Calnexin/Calreticulin cycle
  • Amfr
  • Derl1
  • Engase
  • LOC100360645
  • Ngly1
  • Psmc1
  • Rad23b
  • Rps27a
  • Saks1
  • Uba80
  • Ubb
  • Ubbl1
  • Ubc
  • Ubcep1
  • Ubcl1
  • Ubxn1
  • Vcp
Rattus norvegicus (Norway rat)
Keratan sulfate degradation
  • Acan
  • Agc
  • Agc1
  • Fmod
  • Glb1
  • Glb1l
  • Glb1l2
  • Glb1l3
  • Gns
  • Hexa
  • Hexb
  • Kera
  • Lcn
  • Ldc
  • Lum
  • Omd
  • Prelp
Rattus norvegicus (Norway rat)
Glycosphingolipid catabolism
  • AABR07013255.1
  • Arsa
  • Arsb
  • Arse
  • Arsg
  • Arsi
  • Arsj
  • Arsk
  • Arsl
  • Asah1
  • Asah2
  • Cca1
  • Ctsa
  • Enpp7
  • Galc
  • Gba
  • Gba1
  • Gba2
  • Gba3
  • Gla
  • Glb1
  • Glb1l
  • Glb1l2
  • Glb1l3
  • Gm2a
  • Hexa
  • Hexb
  • M6pr
  • Neu1
  • Neu2
  • Neu3
  • Neu4
  • Psap
  • Sgp1
  • Smpd1
  • Smpd2
  • Smpd3
  • Smpd4
  • Sts
  • Sumf1
  • Sumf2
Rattus norvegicus (Norway rat)
CS/DS degradation
  • Arsb
  • Bcan
  • Behab
  • Bgn
  • Caleb
  • Cspg2
  • Cspg3
  • Cspg4
  • Cspg5
  • Dcn
  • Hexa
  • Hexb
  • Hyal1
  • Hyal3
  • Ids
  • Idua
  • LOC100363795
  • Ncan
  • Ng2
  • Ngc
  • Vcan
Rattus norvegicus (Norway rat)
Pentose phosphate pathway
  • Dera
  • G6pd
  • G6pdx
  • Pgd
  • Pgls
  • Pgm2
  • RBKS
  • Rbks
  • Rpe
  • Rpia
  • Taldo1
  • Tkt
Rattus norvegicus (Norway rat)
Hyaluronan uptake and degradation
  • Cd44
  • Chp
  • Chp1
  • Gus
  • Gusb
  • Hexa
  • Hexb
  • Hyal1
  • Hyal2
  • Hyal3
  • Nhe1
  • Slc9a1
Rattus norvegicus (Norway rat)
Hyaluronan biosynthesis and export
  • Abcc5
  • Cemip
  • HAS1
  • HAS3
  • Has1
  • Has2
  • Has3
  • LOC282821
  • Mrp5
  • RGD1305254
Rattus norvegicus (Norway rat)
Lewis blood group biosynthesis
  • B3galt1
  • B3galt2
  • B3galt4
  • B3galt5
  • B4galnt2
  • Ftb
  • Fut10
  • Fut11
  • Fut2
  • Fut4
  • Fut7
  • Fut9
  • Rfuc-t
  • Sec1
  • Siat10
  • Siat4c
  • Siat6
  • St3gal3
  • St3gal4
  • St3gal6
  • St6galnac6
Rattus norvegicus (Norway rat)
Ficolins bind to repetitive carbohydrate structures on the target cell surface
  • Crarf
  • Fcn1
  • Fcn2
  • Fcna
  • Fcnb
  • Masp1
  • Masp2
  • Masp3
Rattus norvegicus (Norway rat)
Initial triggering of complement
  • AABR07034730.2
  • AABR07060971.1
  • AABR07061001.1
  • AABR07065782.1
  • AABR07065808.1
  • AABR07065812.2
  • AABR07065813.1
  • C1qa
  • C1qb
  • C1qc
  • C1qg
  • C1r
  • C1s
  • C2
  • C4
  • C4a
  • C4b
  • Cfb
  • Colec10
  • Crarf
  • ENSRNOG00000062324
  • ENSRNOG00000062682
  • ENSRNOG00000062762
  • ENSRNOG00000062853
  • ENSRNOG00000062915
  • ENSRNOG00000062976
  • ENSRNOG00000063148
  • ENSRNOG00000063329
  • ENSRNOG00000063340
  • ENSRNOG00000063341
  • ENSRNOG00000063422
  • ENSRNOG00000063550
  • ENSRNOG00000063572
  • ENSRNOG00000063707
  • ENSRNOG00000063791
  • ENSRNOG00000064041
  • ENSRNOG00000064061
  • ENSRNOG00000064085
  • ENSRNOG00000064245
  • ENSRNOG00000064481
  • ENSRNOG00000064582
  • ENSRNOG00000065160
  • ENSRNOG00000065181
  • ENSRNOG00000065191
  • ENSRNOG00000065237
  • ENSRNOG00000065406
  • ENSRNOG00000065564
  • ENSRNOG00000065629
  • ENSRNOG00000065670
  • ENSRNOG00000065675
  • ENSRNOG00000065690
  • ENSRNOG00000065855
  • ENSRNOG00000066010
  • ENSRNOG00000066072
  • ENSRNOG00000066203
  • ENSRNOG00000066380
  • ENSRNOG00000066406
  • ENSRNOG00000066431
  • ENSRNOG00000066785
  • ENSRNOG00000066812
  • ENSRNOG00000066814
  • ENSRNOG00000066904
  • ENSRNOG00000066922
  • ENSRNOG00000066926
  • ENSRNOG00000066971
  • ENSRNOG00000067010
  • ENSRNOG00000067025
  • ENSRNOG00000067233
  • ENSRNOG00000067273
  • ENSRNOG00000067516
  • ENSRNOG00000067603
  • ENSRNOG00000067643
  • ENSRNOG00000067679
  • ENSRNOG00000067883
  • ENSRNOG00000068055
  • ENSRNOG00000068059
  • ENSRNOG00000068381
  • ENSRNOG00000068499
  • ENSRNOG00000068847
  • ENSRNOG00000069193
  • ENSRNOG00000069427
  • ENSRNOG00000069491
  • ENSRNOG00000069766
  • ENSRNOG00000069828
  • ENSRNOG00000069901
  • ENSRNOG00000069940
  • ENSRNOG00000070091
  • ENSRNOG00000070192
  • ENSRNOG00000070244
  • ENSRNOG00000070247
  • ENSRNOG00000070810
  • ENSRNOG00000070812
  • ENSRNOG00000070816
  • ENSRNOG00000070832
  • ENSRNOG00000070933
  • ENSRNOG00000071049
  • ENSRNOG00000071091
  • Fcn1
  • Fcn2
  • Fcna
  • Fcnb
  • Igkv2-112l1
  • Igkv8-30l1
  • Igkvl-ps6
  • Igkvl10
  • Igkvl12
  • Igkvl13
  • Igkvl2
  • Iglc1
  • Igll1
  • LOC100363522
  • LOC100365500
  • LOC100911032
  • LOC102551948
  • LOC690813
  • Masp1
  • Masp2
  • Masp3
  • Mbl2
  • RGD1561722
  • RGD1564696
  • r-gsp
Rattus norvegicus (Norway rat)
Lectin pathway of complement activation
  • Colec10
  • Crarf
  • Fcn1
  • Fcn2
  • Fcna
  • Fcnb
  • Masp1
  • Masp2
  • Masp3
  • Mbl2
Rattus norvegicus (Norway rat)
Antimicrobial peptides
  • Bpi
  • Bpifa1
  • Bpifa2
  • Bpifb1
  • Bpifb2
  • Bpifb4
  • Bpifb6
  • Camp
  • Chga
  • Clu
  • Ctsg
  • Ear1
  • Elane
  • Eppin
  • Itln1
  • LOC100361909
  • LOC100365995
  • LOC102554637
  • LOC299567
  • LOC474169
  • LOC683849
  • Leap2
  • Lplunc1
  • Lplunc4
  • Ltf
  • Lyz
  • Lyz1
  • Pap
  • Pap1
  • Pap2
  • Pap3
  • Pglyrp
  • Pglyrp1
  • Pglyrp2
  • Pglyrp4
  • Pgrp
  • Pla2g2a
  • Plunc
  • Prss1
  • Prss2
  • Prss2l1
  • Prss3
  • Prtn3
  • Psp
  • R15
  • Raf1
  • Raf4
  • Reg2
  • Reg3
  • Reg3a
  • Reg3b
  • Reg3g
  • Rnase2
  • Rnase6
  • Ry2g5
  • Spinlw1
  • Stath
  • Svs3b
  • Trp1
  • Try1
  • Try10
  • Try2
  • Try4
  • Try5
  • Tryp1
Rattus norvegicus (Norway rat)
Cellular hexose transport
  • Fgf21
  • GLUT7
  • Glut1
  • Glut2
  • Glut3
  • Glut4
  • Glut8
  • Glutx1
  • Mfsd4b
  • Mfsd4b1
  • RGD1559971
  • RGD1561777
  • Rag1ap1
  • Rga
  • Sglt1
  • Sglt2
  • Slc2a1
  • Slc2a10
  • Slc2a12
  • Slc2a2
  • Slc2a3
  • Slc2a4
  • Slc2a7
  • Slc2a8
  • Slc2a9
  • Slc45a3
  • Slc50a1
  • Slc5a1
  • Slc5a10
  • Slc5a2
  • Slc5a4
  • Slc5a9
Rattus norvegicus (Norway rat)

About Release Notes Help Feedback

International Collaboration

GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01


Logo License Policies Site Map

Contact: support@glycosmos.org

This work is licensed under Creative Commons Attribution 4.0 International


GlyCosmos Portal v4.0.0

Last updated: August 19, 2024