GlyCosmos Portal

GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source	Last Updated
Reactome	March 20, 2024
ECODAB	April 1, 2019

Displaying entries **1 - 25** of **1070** in total

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Pathway Name ▼	Protein Name	UniProt ID	Gene Symbol	Organism
trans-Golgi Network Vesicle Budding	ADP-ribosylation factor 1 Golgi brefeldin A resistant guanine nucleotide exchange factor 1 Synaptosomal-associated protein 23 Syntaxin-4 Vesicle-associated membrane protein 2 Vesicle-associated membrane protein 7 Vesicle-associated membrane protein 8	F1M8X9 O70377 P63045 P84079 Q08850 Q9JHW5 Q9WUF4	Arf1 Gbf1 Snap23 Stx4 Stx4a Syb2 Sybl1 Vamp2 Vamp7 Vamp8	Rattus norvegicus (Norway rat)
snRNP Assembly	Aladin WD repeat nucleoporin GEM (Nuclear organelle) associated protein 8 Gem (nuclear organelle) associated protein 4 Gem (nuclear organelle) associated protein 5 Gem (nuclear organelle) associated protein 6 Gem (nuclear organelle) associated protein 7-like 1 Gem (nuclear organelle) associated protein 7 Gem-associated protein 2 LOC683983 protein Methylosome protein WDR77 Methylosome subunit pICln Nuclear envelope pore membrane protein POM 121 Nuclear pore complex protein Nup107 Nuclear pore complex protein Nup153 Nuclear pore complex protein Nup155 Nuclear pore complex protein Nup50 Nuclear pore complex protein Nup54 Nuclear pore complex protein Nup85 Nuclear pore complex protein Nup88 Nuclear pore complex protein Nup93 Nuclear pore complex protein Nup98-Nup96 Nuclear pore glycoprotein p62 Nuclear pore membrane glycoprotein 210 Nucleoporin 133 Nucleoporin 160 Nucleoporin 205 Nucleoporin 214 Nucleoporin 37 Nucleoporin NDC1 Nucleoporin NUP188 Nucleoporin NUP35 Nucleoporin NUP42 Nucleoporin p58/p45 Nucleoprotein TPR Protein SEC13 homolog Protein arginine N-methyltransferase 5 RAN binding protein 2 RNA helicase Sm protein F Small nuclear ribonucleoprotein E Small nuclear ribonucleoprotein G Small nuclear ribonucleoprotein Sm D2 Small nuclear ribonucleoprotein Sm D3 Small nuclear ribonucleoprotein-associated protein B Snurportin-1 Survival motor neuron protein Trimethylguanosine synthase mRNA export factor	A0A0G2K3M4 A0A8I5YC36 A0A8I5YCH6 A0A8I5ZJ67 A0A8I5ZR44 A0A8I6AI37 B0BNB5 B5DEP7 D3Z8B2 D3ZBL6 D3ZGD0 D3ZHV0 D3ZSP1 D4A0E8 D4AAT4 D4ACK1 F1LRC6 F1LWL5 F1M629 F1MA98 F1MAM8 G3V972 M0R5G2 O08587 O08658 O35876 P11654 P17136 P17955 P37199 P49791 P49793 P52590 P52591 P70581 P70582 P85107 Q04753 Q3SWS8 Q4QQS8 Q4QR85 Q5XFW8 Q66HC5 Q68FP5 Q68FY1 Q6AXN4 Q6AY77 Q9QZP1	Aaas Clns1a Ddx20 Fam51a1 Gemin2 Gemin4 Gemin5 Gemin6 Gemin7 Gemin7l1 Gemin8 Gp210 Icln LOC683983 LOC687679 Mep50 Mrnp41 Ncoa6ip Ndc1 Npap60 Nup107 Nup121 Nup133 Nup153 Nup155 Nup160 Nup188 Nup205 Nup210 Nup214 Nup35 Nup37 Nup42 Nup43 Nup50 Nup53 Nup54 Nup58 Nup62 Nup84 Nup85 Nup88 Nup93 Nup98 Nupl1 Nupl2 Pcnt1 Pimt Pom121 Pom210 Prmt5 Rae1 Ranbp2 Rcl1 Rnut1 SNRPD2 SNRPD3 Sec13 Sec13l1 Sip1 Smn Smn1 Snrpb Snrpd2 Snrpd3 Snrpe Snrpepl2 Snrpf Snrpg Snrpgl1 Snupn Tgs1 Tmem48 Tpr Wdr77	Rattus norvegicus (Norway rat)
pre-mRNA splicing	116 kDa U5 small nuclear ribonucleoprotein component Aly/REF export factor Apoptotic chromatin condensation inducer 1 Arsenite-resistance protein 2 BUD13 homolog Beta-catenin-like protein 1 CWC25 spliceosome-associated protein homolog Calcium homeostasis endoplasmic reticulum protein Cdc40 protein Cell division cycle 5-like protein Coiled-coil domain containing 12 Crooked neck-like protein 1 DNA-directed RNA polymerase II subunit RPB7 DNA-directed RNA polymerase subunit beta DNA-directed RNA polymerase subunit DNA-directed RNA polymerases I, II, and III subunit RPABC1 DNA-directed RNA polymerases I, II, and III subunit RPABC2 DNA-directed RNA polymerases I, II, and III subunit RPABC3 DNA-directed RNA polymerases I, II, and III subunit RPABC5 Eukaryotic initiation factor 4A-III Family with sequence similarity 50, member A Fus RNA binding protein G patch domain containing 1 General transcription factor IIF subunit 1 General transcription factor IIF subunit 2 HIV-1 Tat specific factor 1 Heat shock cognate 71 kDa protein Heterogeneous nuclear ribonucleoprotein A1 Heterogeneous nuclear ribonucleoprotein A3-like Heterogeneous nuclear ribonucleoprotein C Heterogeneous nuclear ribonucleoprotein D0 Heterogeneous nuclear ribonucleoprotein F Heterogeneous nuclear ribonucleoprotein H2 Heterogeneous nuclear ribonucleoprotein H Heterogeneous nuclear ribonucleoprotein K Heterogeneous nuclear ribonucleoprotein L Heterogeneous nuclear ribonucleoprotein R, pseudogene 2 Heterogeneous nuclear ribonucleoprotein R Heterogeneous nuclear ribonucleoprotein U Heterogeneous nuclear ribonucleoproteins A2/B1 Histone deacetylase complex subunit SAP18 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated Leukocyte receptor cluster member 1 Luc7-like protein Mago homolog B, exon junction complex subunit Mtr4 exosome RNA helicase NF-kappa-B-activating protein NFKB activating protein NHP2-like protein 1 Nuclear cap-binding protein subunit 1 Nuclear cap-binding protein subunit 2 Nuclear speckle splicing regulatory protein 1 PHD finger-like domain-containing protein 5A PRKR interacting protein 1 Peptidyl-prolyl cis-trans isomerase-like 3 Peptidyl-prolyl cis-trans isomerase Peptidyl-prolyl cis-trans isomerase Peptidyl-prolyl cis-trans isomerase Peptidylprolyl isomerase domain and WD repeat containing 1 Pinin Pleiotropic regulator 1 Poly(U)-binding-splicing factor PUF60 Poly(rC) binding protein 1 Poly(rC) binding protein 2 Polyglutamine-binding protein 1 Polypyrimidine tract-binding protein 1 Pre-mRNA processing factor 40 homolog A Pre-mRNA processing factor 4 Pre-mRNA processing factor 8 Pre-mRNA-processing factor 19 Pre-mRNA-processing factor 6 Pre-mRNA-splicing factor 18 Pre-mRNA-splicing factor 38A Pre-mRNA-splicing factor CWC22 homolog Pre-mRNA-splicing factor ISY1 homolog Pre-mRNA-splicing factor RBM22 Pre-mRNA-splicing factor SLU7 Pre-mRNA-splicing factor SPF27 Pre-mRNA-splicing factor SYF1 Pre-mRNA-splicing factor SYF2 Probable ATP-dependent RNA helicase DDX46 Probable ATP-dependent RNA helicase DDX5 Proline rich mitotic checkpoint control factor Protein BUD31 homolog Protein CASC3 Protein FAM32A Protein Red Protein mago nashi homolog RING-type E3 ubiquitin transferase RNA binding motif protein 25-like 1 RNA binding motif protein 25 RNA binding motif protein 39 RNA binding motif protein 7 RNA helicase RNA helicase RNA helicase RNA helicase RNA helicase RNA helicase RNA helicase RNA polymerase II subunit C RNA polymerase II subunit D RNA polymerase II subunit I RNA polymerase II subunit J RNA-binding motif protein, X chromosome RNA-binding motif protein, X-linked 2 RNA-binding protein 10 RNA-binding protein 42 RNA-binding protein 5 RNA-binding protein 8A RNA-binding protein with serine-rich domain 1 RRM domain-containing protein SNW domain-containing protein 1 STING ER exit protein SURP and G-patch domain-containing protein 1 Serine and arginine repetitive matrix 1 Serine and arginine rich splicing factor 10 Serine and arginine rich splicing factor 11 Serine and arginine rich splicing factor 12 Serine and arginine rich splicing factor 3 Serine and arginine rich splicing factor 7 Serine and arginine rich splicing factor 8 Serine/arginine repetitive matrix 2 Serine/arginine-rich splicing factor 1 Serine/arginine-rich splicing factor 2 Serine/arginine-rich splicing factor 5 Serine/arginine-rich splicing factor 9 Serine/threonine-protein kinase PRP4 homolog Similar to human chromosome 9 open reading frame 78 Similar to microfibrillar-associated protein 1 Sm protein F Smad nuclear interacting protein 1 Small nuclear ribonucleoprotein E Small nuclear ribonucleoprotein G Small nuclear ribonucleoprotein Sm D2 Small nuclear ribonucleoprotein Sm D3 Small nuclear ribonucleoprotein U5 subunit 40 Small nuclear ribonucleoprotein polypeptide A' Small nuclear ribonucleoprotein-associated protein B Small nuclear ribonucleoprotein-associated protein N Spliceosome RNA helicase Ddx39b Spliceosome-associated protein CWC15 homolog Splicing factor 1 Splicing factor 3A subunit 1 Splicing factor 3A subunit 2 Splicing factor 3B subunit 3 Splicing factor 3B subunit 4 Splicing factor 3B subunit 5 Splicing factor 3a, subunit 3 Splicing factor 3b, subunit 1 Splicing factor 3b, subunit 2 Splicing factor 45 Splicing factor Cactin Splicing factor U2AF 26 kDa subunit Splicing factor U2AF subunit Splicing factor YJU2 Survival of motor neuron-related-splicing factor 30 Transcription elongation regulator 1 Transformer-2 protein homolog beta U1 small nuclear ribonucleoprotein 70 kDa U1 small nuclear ribonucleoprotein A U1 small nuclear ribonucleoprotein C U2 small nuclear RNA auxiliary factor 1 U2 snRNP-associated SURP domain containing U4/U6 small nuclear ribonucleoprotein Prp31 U4/U6 small nuclear ribonucleoprotein Prp3 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein U4/U6.U5 tri-snRNP-associated protein 1 U5 small nuclear ribonucleoprotein 200 kDa helicase U6 snRNA-associated Sm-like protein LSm3 U6 snRNA-associated Sm-like protein LSm4 U6 snRNA-associated Sm-like protein LSm5 UBL fusion protein SDE2 UPF3B, regulator of nonsense mediated mRNA decay Ubiquitin-like protein 5 WD repeat-containing protein 70 WD40 repeat-containing protein SMU1 WW domain-binding protein 11 WW domain-binding protein 4 Y-box-binding protein 1 Zinc finger protein 830 histidine--tRNA ligase ubiquitinyl hydrolase 1	A0A0G2JTI7 A0A0G2JTM6 A0A0G2K283 A0A0G2K4P5 A0A0G2QC38 A0A0U1RRP3 A0A0U1RS26 A0A8I5Y5S4 A0A8I5ZK98 A0A8I5ZKV9 A0A8I5ZLP6 A0A8I5ZMN0 A0A8I5ZMR4 A0A8I5ZP60 A0A8I5ZQ92 A0A8I5ZR44 A0A8I5ZSN8 A0A8I5ZV21 A0A8I5ZV38 A0A8I5ZVI3 A0A8I5ZWC8 A0A8I5ZXP5 A0A8I5ZXU0 A0A8I6A2P1 A0A8I6A2X2 A0A8I6A2Y2 A0A8I6A5P0 A0A8I6A854 A0A8I6A8Y6 A0A8I6A9Y1 A0A8I6AB48 A0A8I6AB60 A0A8I6ABZ7 A0A8I6ACC7 A0A8I6AFZ5 A0A8I6AH91 A0A8I6AI37 A0A8I6AM26 A0A8I6AMZ5 A0A8I6APJ0 A0A8I6AUP1 A0A8I6AXL7 A0A8I6GJW5 A0A8I6GLQ3 A0A8I6GMR5 A0A8I6GMR8 A0A8J8XB26 A0A8J8XIU8 A1A5S1 A7VJC2 B0BMS9 B0BN49 B0BNE2 B1WC40 B2GUU0 B2GV05 B2GV41 B2RYA6 B2RYC1 B2RYG1 B2RZ74 B5DEP7 B5DFM8 D3ZAX5 D3ZAY8 D3ZCL3 D3ZD76 D3ZD97 D3ZER8 D3ZFB2 D3ZG07 D3ZGL5 D3ZKZ0 D3ZQI0 D3ZQM0 D3ZR17 D3ZSP1 D3ZTL0 D3ZVP6 D4A321 D4A5A6 D4A5T1 D4A6A2 D4A7J8 D4A7U6 D4A944 D4A997 D4AAT4 D4AEG3 E9PST5 E9PT66 F1LM66 F1LNJ2 F1LQ48 F1LSC3 F1LU70 F1M0X6 F7FHL6 G3V6H2 G3V7F6 G3V7T6 G3V8Y5 G3V9M1 G3V9M8 G3V9R8 M0RBB1 M0RBH0 M0RCG9 M0RCY0 O08837 O70454 O88828 P04256 P17136 P55770 P61980 P62489 P62961 P62997 P63018 P63155 P63164 P70501 P83871 Q00438 Q01750 Q09167 Q27W01 Q27W02 Q3B8Q2 Q3MHS2 Q4FZU3 Q4KLI4 Q4KLI7 Q4QQU1 Q4QQU6 Q4QRB2 Q4V7C9 Q4V7D7 Q4V898 Q4V8K2 Q566E4 Q56A27 Q5BJN8 Q5BJP2 Q5EB90 Q5EB92 Q5HZF2 Q5M9G6 Q5PPI1 Q5PQK2 Q5PQQ2 Q5RKH1 Q5U214 Q5XIW8 Q62780 Q63413 Q66HG8 Q68FU8 Q6AXT7 Q6AXT8 Q6AY02 Q6AY09 Q6AY96 Q6AYB3 Q6AYK1 Q6AYL5 Q6AYU2 Q6IMY8 Q6PCT5 Q6PDU1 Q794E4 Q7TP17 Q80ZG5 Q812D3 Q8K3X0 Q8VHV7 Q99M63 Q99PK0 Q9JJ54 Q9JKB8 Q9JMJ4 Q9WUC8 Q9WV25	AABR07026797.1 AABR07029847.1 AABR07065078.1 AC109542.1 Acin1 Alyref Ath55 Auf1 Bat1 Bat1a Bcas2 Bud13 Bud31 Bwd C3h9orf78 Cactin Casc3 Cbp20 Cbp80 Ccdc12 Ccdc16 Ccdc55 Cdc40 Cdc5l Cherp Cl-4 Crn Crnkl1 Ctnnbl1 Cwc15 Cwc22 Cwc25 Cyp10l Ddx23 Ddx39b Ddx42 Ddx46 Ddx48 Ddx5 Dhx15 Dhx35 Dhx38 Dhx8 Dhx9 Edg2 Eftud2 Eif4a3 Fam32a Fam50a Fblim1 Fus G10 Gpatch1 Gtf2f1 Gtf2f2 Hars2 Hel117 Hnrnp Hnrnpa1 Hnrnpa2b1 Hnrnpa3 Hnrnpc Hnrnpd Hnrnpf Hnrnph1 Hnrnph2 Hnrnpk Hnrnpl Hnrnpr Hnrnpr-ps2 Hnrnpu Hnrpa1 Hnrpa2b1 Hnrpc Hnrpd Hnrpf Hnrph Hnrph1 Hnrph2 Hnrpk Hnrpr Hnrpu Hrs Hsc70 Hsc73 Hspa8 Htatsf1 Ik Ini Isy1 Kcrf LOC100360750 LOC100910750 LOC100911361 LOC120096281 LOC120098305 LOC687679 LSM3 LSM4 LSM5 Leng1 Lsm3 Lsm4 Lsm5 Lsm5l1 Lsm6 Lsm6l1 Lsm7 Luc7l3 Magoh Magohb Mfap1al1 Mln51 Mtrex Ncbp1 Ncbp2 Nhp2l1 Nkap Nsrp1 Nsrp70 Otag12 Pcbp1 Pcbp2 Pcdc5rp Phf5a Plrg1 Pnn Polr2a Polr2b Polr2c Polr2d Polr2e Polr2f Polr2g Polr2i Polr2j Ppih Ppil1 Ppil2 Ppil3 Ppil4 Ppwd1 Pqbp1 Prcc Prkrip1 Prp18 Prp19 Prp4k Prpf18 Prpf19 Prpf3 Prpf31 Prpf38a Prpf4 Prpf40a Prpf4b Prpf6 Prpf8 Ptb Ptbp1 Puf60 Pybp RGD1305178 RGD1561590 RGD1563634 RGD1564148 Rap30 Rbm10 Rbm17 Rbm22 Rbm25 Rbm25l1 Rbm39 Rbm42 Rbm5 Rbm7 Rbm8 Rbm8a Rbmx Rbmx2 Rbmxrt Rnps1 SNRPD2 SNRPD3 Sap18 Sap18-ps1 Sart1 Sde2 Sf1 Sf3a1 Sf3a2 Sf3a3 Sf3b1 Sf3b2 Sf3b3 Sf3b4 Sf3b5 Sf4 Sfrs10 Sfrs2 Sfrs5 Sfrs9 Siahbp1 Sipp1 Slu7 Smn Smndc1 Smu1 Snip1 Snrnp200 Snrnp27 Snrnp40 Snrnp70 Snrpa Snrpa1 Snrpb Snrpc Snrpd2 Snrpd3 Snrpe Snrpepl2 Snrpf Snrpg Snrpgl1 Snrpn Snu13 Snw1 Spf30 Srrm1 Srrm2 Srrt Srsf1 Srsf10 Srsf11 Srsf12 Srsf2 Srsf3 Srsf5 Srsf7 Srsf8 Srsf9 Steep1 Sugp1 Syf1 Syf2 Tbfii Tcerg1 Tra2b U2af1 U2af1l4 U2af2 U2surp Uap56 Ubl5 Upf3b Usp39 Wbp11 Wbp4 Wdr70 Xab2 YJU2 Yb1 Ybx1 Yju2 Zfp830 Zmat2 Znf830	Rattus norvegicus (Norway rat)
phospho-PLA2 pathway	Cytosolic phospholipase A2 Mitogen-activated protein kinase 1	P50393 P63086	Cpla2 Erk2 Mapk Mapk1 Pla2g4 Pla2g4a Prkm1	Rattus norvegicus (Norway rat)
p75NTR recruits signalling complexes	Beta-nerve growth factor Inhibitor of nuclear factor kappa-B kinase subunit beta Myeloid differentiation primary response protein MyD88 Polyubiquitin-B Polyubiquitin-C Protein kinase C iota type Receptor-interacting serine/threonine-protein kinase 2 Sequestosome-1 TNF receptor-associated factor 6 Tumor necrosis factor receptor superfamily member 16 Ubiquitin B-like Ubiquitin-ribosomal protein eS31 fusion protein non-specific serine/threonine protein kinase	A0A0G2JYX9 A0A8I6A5Y3 B5DF45 F1M7Y5 G3V783 O08623 P07174 P0CG51 P25427 P62982 Q63429 Q6Y1S1 Q9QY78	Ikbkb Ikkb Irak1 LOC100360645 Myd88 Ngf Ngfb Ngfr Pkcl Prkci Ripk2 Rps27a Sqstm1 Tnfrsf16 Traf6 Uba80 Ubb Ubbl1 Ubc Ubcep1 Ubcl1 Zip	Rattus norvegicus (Norway rat)
p53-Dependent G1 DNA Damage Response	Cyclin E2 Cyclin-A1 Cyclin-A2 Cyclin-dependent kinase 2 Cyclin-dependent kinase inhibitor 1A Cyclin-dependent kinase inhibitor 1B G1/S-specific cyclin-E1	A0A0G2JVY9 A0A8I5ZZ18 D3ZQ41 O08769 P39949 Q63699 Q6AY13	Ccna1 Ccna2 Ccne Ccne1 Ccne2 Cdk2 Cdkn1a Cdkn1b Cdkn2 p27Kip1	Rattus norvegicus (Norway rat)
p38MAPK events	GTPase HRas GTPase KRas GTPase NRas MAP kinase-activated protein kinase 3 MAPK activated protein kinase 2 Mapk11 protein Mitogen-activated protein kinase 14 Ral guanine nucleotide dissociation stimulator	D4A3U7 P08644 P20171 P70618 Q03386 Q04970 Q66H84 Q80ZF4	Csbp1 Csbp2 Hras Hras1 Kras Kras2 Mapk11 Mapk14 Mapkapk2 Mapkapk3 Nras Ralgds	Rattus norvegicus (Norway rat)
p130Cas linkage to MAPK signaling for integrins	Adapter molecule crk Amyloid beta A4 precursor protein-binding family B member 1-interacting protein Breast cancer anti-estrogen resistance protein 1 Fibrinogen alpha chain Fibrinogen beta chain Fibrinogen gamma chain Fibronectin Focal adhesion kinase 1 Integrin beta-3 Integrin subunit alpha 2b Proto-oncogene tyrosine-protein kinase Src Ras-related protein Rap-1A Ras-related protein Rap-1b Talin 1	A0A8I6ABG6 A0A8I6GGN2 D3ZDZ1 O35346 P02680 P04937 P06399 P14480 P62836 Q62636 Q63767 Q63768 Q8R2H2 Q9WUD9	Apbb1ip Bcar1 Cas Crk Crkas Crko Fak Fak1 Fga Fgb Fgg Fn1 Itga2b Itgb3 Krev1 Ptk2 Rap1a Rap1b Src Tln1	Rattus norvegicus (Norway rat)
mitochondrial fatty acid beta-oxidation of unsaturated fatty acids	2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing], mitochondrial Enoyl-CoA delta isomerase 1, mitochondrial Medium-chain specific acyl-CoA dehydrogenase, mitochondrial	P08503 P23965 Q64591	Acadm Dci Decr Decr1 Eci1	Rattus norvegicus (Norway rat)
mTORC1-mediated signalling	14-3-3 protein beta/alpha AKT1 substrate 1 Eukaryotic elongation factor 2 kinase Eukaryotic translation initiation factor 4 gamma 1 Eukaryotic translation initiation factor 4E-binding protein 1 Eukaryotic translation initiation factor 4E GTP-binding protein Rheb Neutral amino acid transporter 9 Peptidyl-prolyl cis-trans isomerase FKBP1A Ragulator complex protein LAMTOR1 Ragulator complex protein LAMTOR3 Ragulator complex protein LAMTOR4 Ragulator complex protein LAMTOR5 Ras-related GTP-binding protein A Ras-related GTP-binding protein B Ras-related GTP-binding protein Ras-related GTP-binding protein Regulatory associated protein of MTOR, complex 1 Ribosomal protein S6 kinase beta-1 Roadblock/LAMTOR2 domain-containing protein Serine/threonine-protein kinase mTOR Small ribosomal subunit protein eS6 Target of rapamycin complex subunit LST8	A0A8I5ZRQ9 A0A8I6ADH7 B2RZ38 D3ZDU2 D3ZF11 D4AD29 M0RD03 P35213 P42346 P62755 P63074 P67999 P70531 Q0D2L6 Q3B8Q3 Q5U204 Q62622 Q62639 Q62658 Q63486 Q63487 Q6P791 Q9Z2K5	Akt1s1 ENSRNOG00000066475 Eef2k Eif4e Eif4ebp1 Eif4g1 Fkbp1 Fkbp1a Frap1 Gbl Lamtor1 Lamtor3 Lamtor4 Lamtor5 Lst8 Map2k1ip1 Mlst8 Mtor Raft1 Rheb Rps6 Rps6kb1 Rptor RragB Rraga Rragc Rragc_predicted Rragd Slc38a9 Ywhab	Rattus norvegicus (Norway rat)
mRNA 3'-end processing	ATP-dependent RNA helicase DDX39A Aly/REF export factor Cdc40 protein Chromatin target of PRMT1 protein Cleavage and polyadenylation specific factor 1 Cleavage and polyadenylation specific factor 3 Cleavage and polyadenylation specificity factor subunit 2 Cleavage and polyadenylation specificity factor subunit 4 Cleavage and polyadenylation specificity factor subunit 5 Cleavage and polyadenylation specificity factor subunit 6 Cleavage and polyadenylation specificity factor subunit 7 Cleavage stimulation factor subunit 1 Cleavage stimulation factor subunit 2, tau variant Cleavage stimulation factor subunit 2 Cleavage stimulation factor subunit 3 DNA polymerase delta interacting protein 3 Eukaryotic initiation factor 4A-III Mago homolog B, exon junction complex subunit Nuclear cap-binding protein subunit 1 Nuclear cap-binding protein subunit 2 PCF11 cleavage and polyadenylation factor subunit Poly(A) binding protein, nuclear 1 Poly(A) polymerase Polyribonucleotide 5'-hydroxyl-kinase Clp1 Pre-mRNA 3'-end-processing factor FIP1 Pre-mRNA-splicing factor SLU7 Protein CASC3 Protein mago nashi homolog RNA helicase RNA-binding protein 8A RNA-binding protein with serine-rich domain 1 RRM domain-containing protein SAP domain-containing ribonucleoprotein Serine and arginine repetitive matrix 1 Serine and arginine rich splicing factor 11 Serine and arginine rich splicing factor 3 Serine and arginine rich splicing factor 7 Serine/arginine-rich splicing factor 1 Serine/arginine-rich splicing factor 2 Serine/arginine-rich splicing factor 5 Serine/arginine-rich splicing factor 9 Spliceosome RNA helicase Ddx39b Splicing factor U2AF 26 kDa subunit Splicing factor U2AF subunit Symplekin scaffold protein THO complex subunit 2 THO complex subunit 5 homolog THO complex subunit 6 homolog THO complex subunit 7 homolog U2 small nuclear RNA auxiliary factor 1 UAP56-interacting factor UPF3B, regulator of nonsense mediated mRNA decay	A0A0G2JXM5 A0A0G2JYV2 A0A0G2K1E5 A0A0G2K8V3 A0A0G2KA08 A0A0G2QC38 A0A0U1RRP3 A0A8I5ZSN8 A0A8I5ZTR8 A0A8I5ZV21 A0A8I5ZV38 A0A8I5ZW25 A0A8I6A2P1 A0A8I6A5F1 A0A8I6A9Y1 A0A8I6ABD9 A0A8I6AFZ5 A0A8I6AMJ9 A0A8I6G751 A0A8I6GJT1 A0A8I6GMR8 A0A8J8XR33 B1WC40 B2RYC1 D4A321 F1M0X6 F1M4W7 M0RBB1 Q09167 Q27W01 Q27W02 Q3B8Q2 Q498T2 Q498U4 Q4KM65 Q56A27 Q5BJQ6 Q5FVR7 Q5PPI1 Q5PQL4 Q5U216 Q5U317 Q5XI29 Q63413 Q68FX7 Q6AY87 Q6AYK1 Q6PDU1 Q7TP17 Q7TQ84 Q80ZG5 Q8K3X0	AABR07026797.1 Alyref Bat1 Bat1a Casc3 Cbp20 Cbp80 Cdc40 Chtop Cl-4 Clp1 Cpsf1 Cpsf2 Cpsf3 Cpsf4 Cpsf5 Cpsf6 Cpsf7 Cstf1 Cstf2 Cstf2t Cstf3 Ddx39 Ddx39a Ddx39b Ddx48 Ddxl Dhx38 Eif4a3 Fip1l1 Fmip Fop Fyttd1 Hcc1 Hrs Magoh Magohb Mln51 Ncbp1 Ncbp2 Nudt21 Pabpn1 Papola Pcf11 Pdrp Poldip3 Rbm8 Rbm8a Rnps1 Sarnp Sfrs2 Sfrs5 Sfrs9 Slu7 Srrm1 Srsf1 Srsf11 Srsf2 Srsf3 Srsf5 Srsf7 Srsf9 Sympk Thoc2 Thoc5 Thoc6 Thoc7 U2af1 U2af1l4 U2af2 Uap56 Uif Upf3b wdr58	Rattus norvegicus (Norway rat)
eNOS activation	Acyl-protein thioesterase 1 Calmodulin-3 Caveolin-1 Cytoglobin Heat shock protein HSP 90-alpha N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 Nitric oxide synthase 3 RAC-alpha serine/threonine-protein kinase Sepiapterin reductase	O08557 P0DP31 P18297 P41350 P47196 P70470 P82995 Q62600 Q921A4	Akt1 Apt1 CaMIII Calm3 Cam3 Camc Cav Cav1 Cygb Ddah Ddah1 Hsp86 Hsp90aa1 Hspca Lypla1 Nos3 Spr Stap	Rattus norvegicus (Norway rat)
cGMP effects	Dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A Dual specificity calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1B High affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A Inositol 1,4,5-triphosphate receptor associated 1 Inositol 1,4,5-trisphosphate-gated calcium channel ITPR1 Phosphodiesterase cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A cGMP-dependent 3',5'-cyclic phosphodiesterase cGMP-dependent protein kinase 2 cGMP-dependent protein kinase cGMP-specific 3',5'-cyclic phosphodiesterase	A0A8I6A416 A0A8I6A9E8 D3ZDF3 O54735 P29994 Q01062 Q01066 Q64595 Q8QZV1 Q8VID6 Q9QYJ6	AABR07006724.1 Insp3r Irag1 Itpr1 Mrvi1 Pde10a Pde11a Pde1a Pde1b Pde1b1 Pde2a Pde5 Pde5a Pde9a Prkg1 Prkg2	Rattus norvegicus (Norway rat)
betaKlotho-mediated ligand binding	Fibroblast growth factor receptor 4 Fibroblast growth factor Klotho beta	D3Z8T6 Q498D6 Q8VI81	FGF15 Fgf19 Fgf8a Fgfr4 Klb	Rattus norvegicus (Norway rat)
alpha-linolenic acid (ALA) metabolism	3-ketoacyl-CoA thiolase B, peroxisomal ATP-binding cassette sub-family D member 1 Acyl-CoA (8-3)-desaturase Acyl-CoA 6-desaturase Acyl-coenzyme A thioesterase 8 Elongation of very long chain fatty acids protein 1 Elongation of very long chain fatty acids protein 3 Long-chain-fatty-acid--CoA ligase 1 Peroxisomal acyl-coenzyme A oxidase 1 Peroxisomal multifunctional enzyme type 2 Sterol carrier protein 2 Very long chain fatty acid elongase 2 Very long chain fatty acid elongase 5	A0A1B0GWP1 D3ZHR2 D3ZPX9 D4A612 P07871 P07872 P11915 P18163 P97852 Q8VHK0 Q920L7 Q920R3 Q9Z122	Abcd1 Acaa1 Acaa1b Acot8 Acox Acox1 Acs1 Acsl1 Acsl2 ELOVL1 ELOVL3 Edh17b4 Elovl1 Elovl2 Elovl3 Elovl5 Facl2 Fads1 Fads2 Fadsd6 Hsd17b4 Pte1 Scp-2 Scp2 Ssc2	Rattus norvegicus (Norway rat)
activated TAK1 mediates p38 MAPK activation	Interleukin-1 receptor-associated kinase-like 2 MAP kinase-activated protein kinase 3 MAPK activated protein kinase 2 Mapk11 protein Mitogen-activated protein kinase 14 Mitogen-activated protein kinase kinase kinase 7 NF-kappa-B essential modulator NF-kappa-B essential modulator Nucleotide-binding oligomerization domain containing 1 Nucleotide-binding oligomerization domain containing 2 Receptor-interacting serine/threonine-protein kinase 2 TGF-beta activated kinase 1 (MAP3K7) binding protein 3 TGF-beta activated kinase 1/MAP3K7 binding protein 1 TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 TNF receptor-associated factor 6 Ubiquitin-conjugating enzyme E2 variant 1 mitogen-activated protein kinase kinase mitogen-activated protein kinase kinase non-specific serine/threonine protein kinase	A0A0G2JYX9 A0A0G2K4Z7 A0A0U1RRU5 A0A8I6A3Q1 A0A8I6ABN5 A0A8I6AH74 B5DF45 D4A3U7 D4ADT7 G3V783 M0R7E7 P0C8E4 P70618 Q4QQS0 Q5U303 Q66H84 Q6TMG5 Q80ZF4 Q925D6	Csbp1 Csbp2 ENSRNOG00000067007 Ikbkg Irak1 Irak2 Map2k3 Map2k6 Map3k7 Map3k7ip2 Mapk11 Mapk14 Mapkapk2 Mapkapk3 Mkk6 Nemo Nod1 Nod2 Ripk2 Tab1 Tab2 Tab3 Traf6	Rattus norvegicus (Norway rat)
Zinc influx into cells by the SLC39 gene family	Metal cation symporter ZIP14 Metal cation symporter ZIP8 Slc39a1 protein Solute carrier family 39 member 2 Zinc transporter ZIP3 Zinc transporter ZIP4 Zinc transporter ZIP6	A0A8I6ABU1 A0JPN2 B5DEF5 D3ZIN1 Q4V887 Q5FVQ0 Q5U1X7	Slc39a1 Slc39a14 Slc39a2 Slc39a3 Slc39a4 Slc39a6 Slc39a8 Zip3 Zip4 Zip6 Zip8	Rattus norvegicus (Norway rat)
Zinc efflux and compartmentalization by the SLC30 family	Proton-coupled zinc antiporter SLC30A1 Proton-coupled zinc antiporter SLC30A8 Zinc transporter	D3ZY54 P0CE46 Q62720	Slc30a1 Slc30a5 Slc30a8 Znt1 Znt8	Rattus norvegicus (Norway rat)
YAP1- and WWTR1 (TAZ)-stimulated gene expression	Histone acetyltransferase T-box transcription factor TBX5 TEA domain transcription factor 1 TEA domain transcription factor 2 Transcriptional coactivator YAP1 Transcriptional enhancer factor TEF-3 Transcriptional enhancer factor TEF-5 WW domain containing transcription regulator 1	A0A0G2K2S9 A0A8I5Y222 A0A8I5ZMT2 A0A8I6AIX9 A0A8I6GMF8 Q2EJA0 Q4V7E6 Q5I2P1	Kat2b Tbx5 Tead1 Tead2 Tead3 Tead4 Wwtr1 Yap Yap1 Yap65	Rattus norvegicus (Norway rat)
Xenobiotics	Aryl hydrocarbon receptor nuclear translocator 2 Aryl hydrocarbon receptor nuclear translocator Aryl hydrocarbon receptor repressor Aryl hydrocarbon receptor Cytochrome P450 1A1 Cytochrome P450 2A1 Cytochrome P450 2A2 Cytochrome P450 2A3 Cytochrome P450 2C26-like Cytochrome P450 2C6 Cytochrome P450 2D4 Cytochrome P450 2E1 Cytochrome P450 2F2 Cytochrome P450 2J3 Cytochrome P450 3A18 Cytochrome P450 3A1 Cytochrome P450 3A2 Cytochrome P450 3A9 Cytochrome P450 3A Cytochrome P450, family 2, subfamily j, polypeptide 16 Cytochrome P450, family 2, subfamily w, polypeptide 1 Cytochrome P450 Cytochrome P450	A0A0G2JTQ9 A0A0G2K5K4 A0A0G2KAI3 A0A8I6AFV7 D4A820 G3V9D2 O35293 P00185 P04800 P05178 P05182 P05183 P11711 P15149 P20812 P41738 P41739 P51538 P51590 Q64581 Q64680 Q75NT5 Q78E60	Ahr Ahrr Arnt Arnt2 Cyp1a-1 Cyp1a1 Cyp2a-1 Cyp2a-2 Cyp2a-3 Cyp2a1 Cyp2a2 Cyp2a3 Cyp2a3a Cyp2b21 Cyp2c-6 Cyp2c6 Cyp2c66 Cyp2d-18 Cyp2d-4 Cyp2d18 Cyp2d4 Cyp2e Cyp2e-1 Cyp2e1 Cyp2f2 Cyp2f4 Cyp2j16 Cyp2j3 Cyp2j9 Cyp2s1 Cyp2w1 Cyp3a-1 Cyp3a-2 Cyp3a1 Cyp3a11 Cyp3a13 Cyp3a18 Cyp3a2 Cyp3a62 Cyp3a9 LOC100912265	Rattus norvegicus (Norway rat)
WNT5A-dependent internalization of FZD4	AP-2 complex subunit alpha-2 AP-2 complex subunit alpha AP-2 complex subunit beta AP-2 complex subunit mu AP-2 complex subunit sigma Beta-arrestin-2 Clathrin heavy chain 1 Clathrin light chain A Clathrin light chain B Dishevelled segment polarity protein 2 Frizzled-4 Protein Wnt-5a Protein kinase C alpha type Protein kinase C beta type Protein kinase C gamma type	A0A8I6A4J2 D3ZB71 P05696 P08081 P08082 P11442 P18484 P29067 P62744 P62944 P63319 P68403 P84092 Q9QXQ7 Q9QZH0	Adtab Ap17 Ap2a1 Ap2a2 Ap2b1 Ap2m1 Ap2s1 Arrb2 Clapb1 Claps2 Clta Cltb Cltc Dvl2 Fzd4 LOC100361515 Pkca Pkcb Pkcc Pkcg Prkca Prkcb Prkcb1 Prkcc Prkcg Wnt-5a Wnt5a	Rattus norvegicus (Norway rat)
WNT5A-dependent internalization of FZD2, FZD5 and ROR2	AP-2 complex subunit alpha-2 AP-2 complex subunit alpha AP-2 complex subunit beta AP-2 complex subunit mu AP-2 complex subunit sigma Clathrin heavy chain 1 Clathrin light chain A Clathrin light chain B Frizzled-2 Frizzled-5 Protein Wnt-5a Receptor tyrosine kinase-like orphan receptor 1 Receptor tyrosine kinase-like orphan receptor 2	A0A8I6A4J2 D3ZNY8 D3ZZ97 P08081 P08082 P11442 P18484 P62744 P62944 P84092 Q08464 Q8CHL0 Q9QXQ7	Adtab Ap17 Ap2a1 Ap2a2 Ap2b1 Ap2m1 Ap2s1 Clapb1 Claps2 Clta Cltb Cltc Fzd2 Fzd5 Ror1 Ror2 Wnt-5a Wnt5a	Rattus norvegicus (Norway rat)
WNT mediated activation of DVL	Casein kinase II subunit alpha Casein kinase II subunit alpha Casein kinase II subunit beta Dishevelled segment polarity protein 2 Dishevelled segment polarity protein 3 Phosphatidylinositol 4-phosphate 5-kinase type-1 beta Segment polarity protein dishevelled homolog DVL-1 non-specific serine/threonine protein kinase	A0A8I6GKX7 D3ZB71 F7FH41 P19139 P67874 Q5CZZ9 Q99PS2 Q9WVB9	Ck1e-2 Ck2n Csnk1e Csnk2a1 Csnk2a2 Csnk2b Dvl1 Dvl2 Dvl3 LOC100361515 Pip5k1b	Rattus norvegicus (Norway rat)
WNT ligand biogenesis and trafficking	Protein Wnt-4 Protein Wnt-5a Protein Wnt Protein Wnt Protein Wnt Protein Wnt Protein Wnt Protein Wnt Protein Wnt Protein Wnt Protein Wnt Protein Wnt Protein Wnt Protein Wnt Protein Wnt Protein Wnt Protein Wnt Protein Wnt Protein wntless homolog Sorting nexin-3 Transmembrane emp24 domain-containing protein 5 Vacuolar protein sorting-associated protein 26A Vacuolar protein sorting-associated protein 29 Vacuolar protein sorting-associated protein 35	A0A0G2K3B7 A0A0G2K6Q8 A0A8I6A874 A0A8I6AN69 B1WBR9 B2RZ78 D3ZF63 D3ZFS0 D3ZND6 D3ZRW5 D4A3K6 D4A3W9 D4A9D7 D4A9J2 F1M077 G3V819 G3V8A5 M0R9D3 Q5U211 Q6AXN3 Q6AY86 Q6P689 Q9QXQ5 Q9QXQ7	Gpr177 Snx3 Tmed5 Vps26 Vps26a Vps29 Vps35 Wls Wnt-4 Wnt-5a Wnt1 Wnt10a Wnt10b Wnt11 Wnt16 Wnt2b Wnt3 Wnt3a Wnt4 Wnt5a Wnt5b Wnt6 Wnt7a Wnt7b Wnt8a Wnt8b Wnt9a Wnt9b	Rattus norvegicus (Norway rat)
VxPx cargo-targeting to cilium	ADP-ribosylation factor 4 Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 Cyclic nucleotide-gated channel alpha-2 Cyclic nucleotide-gated channel alpha-4 Cyclic nucleotide-gated channel beta-1 Exocyst complex component 1 Exocyst complex component 2 Exocyst complex component 3 Exocyst complex component 4 Exocyst complex component 5 Exocyst complex component 6 Exocyst complex component 7 Exocyst complex component 8 Golgi brefeldin A resistant guanine nucleotide exchange factor 1 Polycystin 1, transient receptor potential channel interacting Polycystin-2 Rab-3A-interacting protein Ras-related protein Rab-11A Ras-related protein Rab-8A Rhodopsin	A0A0G2K2V5 A0A8I5ZN27 D4A5F1 F1M8X9 F1MAD3 O54921 O54922 O54923 O54924 P35280 P51489 P61751 P62494 P97878 Q00195 Q1AAU6 Q62739 Q62824 Q62825 Q64359	Arf4 Asap1 CNCG2 CNCG3L CNCG4 Cgn2 Cncg2 Cnga2 Cnga4 Cngb1 Ddef1 Exo70 Exo84 Exoc1 Exoc2 Exoc3 Exoc4 Exoc5 Exoc6 Exoc7 Exoc8 Gbf1 Pkd1 Pkd2 RCNC2 Rab11 Rab11a Rab3ip Rab8 Rab8a Rabin3 Rabin8 Rho Sec10l1 Sec15 Sec15a Sec15l1 Sec5 Sec5l1 Sec6 Sec6l1 Sec8 Sec8l1	Rattus norvegicus (Norway rat)

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