GlyCosmos Portal

GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source	Last Updated
Reactome	March 20, 2024
ECODAB	April 1, 2019

Displaying entries **1301 - 1325** of **2090** in total

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Pathway Name	Protein Name ▲	UniProt ID	Gene Symbol	Organism
Regulation of BACH1 activity	Cullin-1 E3 ubiquitin-protein ligase RBX1 F-box/LRR-repeat protein 17 Polyubiquitin-B Polyubiquitin-C S-phase kinase-associated protein 1 S-phase kinase-associated protein 2 Transcription factor MafK Transcription regulator protein BACH1 Ubiquitin-ribosomal protein eL40 fusion protein Ubiquitin-ribosomal protein eS31 fusion protein	O14867 O60675 P0CG47 P0CG48 P62877 P62979 P62987 P63208 Q13309 Q13616 Q9UF56	BACH1 CUL1 EMC19 FBL17 FBX13 FBXL1 FBXL17 FBXO13 MAFK OCP2 RBX1 RNF75 ROC1 RPS27A SKP1 SKP1A SKP2 TCEB1L UBA52 UBA80 UBB UBC UBCEP1 UBCEP2	Homo sapiens (human)
Loss of Function of FBXW7 in Cancer and NOTCH1 Signaling	Cullin-1 E3 ubiquitin-protein ligase RBX1 Neurogenic locus notch homolog protein 1 S-phase kinase-associated protein 1	P46531 P62877 P63208 Q13616	CUL1 EMC19 NOTCH1 OCP2 RBX1 RNF75 ROC1 SKP1 SKP1A TAN1 TCEB1L	Homo sapiens (human)
RHOBTB3 ATPase cycle	Cullin-3 G1/S-specific cyclin-E1 Hepatocyte growth factor-regulated tyrosine kinase substrate Leucine-rich repeat-containing protein 41 Perilipin-3 Ras-related protein Rab-9A Ras-related protein Rab-9B Rho-related BTB domain-containing protein 3 von Hippel-Lindau disease tumor suppressor	O14964 O60664 O94955 P24864 P40337 P51151 Q13618 Q15345 Q9NP90	CCNE CCNE1 CUL3 HGS HRS KIAA0617 KIAA0878 LRRC41 M6PRBP1 MUF1 PLIN3 RAB9 RAB9A RAB9B RAB9L RHOBTB3 TIP47 VHL	Homo sapiens (human)
Recognition of DNA damage by PCNA-containing replication complex	Cullin-4A Cullin-4B DNA damage-binding protein 1 DNA polymerase delta catalytic subunit DNA polymerase delta subunit 2 DNA polymerase delta subunit 3 DNA polymerase delta subunit 4 DNA polymerase epsilon catalytic subunit A DNA polymerase epsilon subunit 2 DNA polymerase epsilon subunit 3 DNA polymerase epsilon subunit 4 Denticleless protein homolog E3 ubiquitin-protein ligase RAD18 E3 ubiquitin-protein ligase RBX1 Polyubiquitin-B Polyubiquitin-C Proliferating cell nuclear antigen Replication factor C subunit 1 Replication factor C subunit 2 Replication factor C subunit 3 Replication factor C subunit 4 Replication factor C subunit 5 Replication protein A 14 kDa subunit Replication protein A 32 kDa subunit Replication protein A 70 kDa DNA-binding subunit Ubiquitin carboxyl-terminal hydrolase 1 Ubiquitin-conjugating enzyme E2 B Ubiquitin-ribosomal protein eL40 fusion protein Ubiquitin-ribosomal protein eS31 fusion protein WD repeat-containing protein 48	O94782 P0CG47 P0CG48 P12004 P15927 P27694 P28340 P35244 P35249 P35250 P35251 P40937 P40938 P49005 P56282 P62877 P62979 P62987 P63146 Q07864 Q13619 Q13620 Q15054 Q16531 Q8TAF3 Q9HCU8 Q9NR33 Q9NRF9 Q9NS91 Q9NZJ0	CDT2 CDW1 CHRAC17 CUL4A CUL4B DCAF2 DDB1 DPE2 DTL KIAA0039 KIAA0695 KIAA1449 L2DTL PCNA POLD POLD1 POLD2 POLD3 POLD4 POLDS POLE POLE1 POLE2 POLE3 POLE4 RAD18 RAD6B RAMP RBX1 REPA1 REPA2 REPA3 RFC1 RFC140 RFC2 RFC3 RFC4 RFC5 RNF73 RNF75 ROC1 RPA1 RPA14 RPA2 RPA3 RPA32 RPA34 RPA70 RPS27A UAF1 UBA52 UBA80 UBB UBC UBCEP1 UBCEP2 UBCH1 UBE2B USP1 WDR48 XAP1	Homo sapiens (human)
Downregulation of ERBB2 signaling	Cullin-5 E3 ubiquitin-protein ligase CHIP Epidermal growth factor receptor Erbin Heat shock protein HSP 90-alpha Hsp90 co-chaperone Cdc37 Megakaryocyte-associated tyrosine-protein kinase Polyubiquitin-B Polyubiquitin-C Pro-epidermal growth factor Pro-neuregulin-1, membrane-bound isoform Pro-neuregulin-2, membrane-bound isoform Pro-neuregulin-3, membrane-bound isoform Pro-neuregulin-4, membrane-bound isoform Probetacellulin Proepiregulin Proheparin-binding EGF-like growth factor Receptor tyrosine-protein kinase erbB-2 Tyrosine-protein phosphatase non-receptor type 12 Tyrosine-protein phosphatase non-receptor type 18 Ubiquitin-ribosomal protein eL40 fusion protein Ubiquitin-ribosomal protein eS31 fusion protein	O14511 O14944 P00533 P01133 P04626 P07900 P0CG47 P0CG48 P35070 P42679 P56975 P62979 P62987 Q02297 Q05209 Q16543 Q8WWG1 Q93034 Q96RT1 Q99075 Q99952 Q9UNE7	BDP1 BTC CDC37 CDC37A CHIP CTK CUL5 DTR DTS EGF EGFR ERBB ERBB1 ERBB2 ERBB2IP ERBIN EREG GGF HBEGF HEGFL HER1 HER2 HGL HRGA HSP90A HSP90AA1 HSPC1 HSPCA HYL KIAA1225 LAP2 MATK MLN19 NDF NEU NGL NRG1 NRG2 NRG3 NRG4 NTAK PTPN12 PTPN18 RPS27A SMDF STUB1 UBA52 UBA80 UBB UBC UBCEP1 UBCEP2 VACM1	Homo sapiens (human)
Inactivation of CSF3 (G-CSF) signaling	Cullin-5 Elongin-B Elongin-C Granulocyte colony-stimulating factor receptor Granulocyte colony-stimulating factor Non-receptor tyrosine-protein kinase TYK2 Polyubiquitin-B Polyubiquitin-C RING-box protein 2 Signal transducer and activator of transcription 1-alpha/beta Signal transducer and activator of transcription 3 Signal transducer and activator of transcription 5A Signal transducer and activator of transcription 5B Suppressor of cytokine signaling 1 Suppressor of cytokine signaling 3 Tyrosine-protein kinase HCK Tyrosine-protein kinase JAK1 Tyrosine-protein kinase JAK2 Tyrosine-protein kinase Lyn Tyrosine-protein kinase SYK Ubiquitin-conjugating enzyme E2 D1 Ubiquitin-conjugating enzyme E2 D2 Ubiquitin-conjugating enzyme E2 D3 Ubiquitin-ribosomal protein eL40 fusion protein Ubiquitin-ribosomal protein eS31 fusion protein	O14543 O15524 O60674 P07948 P08631 P09919 P0CG47 P0CG48 P23458 P29597 P40763 P42224 P42229 P43405 P51668 P51692 P61077 P62837 P62979 P62987 Q15369 Q15370 Q93034 Q99062 Q9UBF6	APRF C17orf33 CIS3 CSF3 CSF3R CUL5 ELOB ELOC GCSF GCSFR HCK JAK1 JAK1A JAK1B JAK2 JTK8 LYN PUBC1 RBX2 RNF7 ROC2 RPS27A SAG SFT SOCS1 SOCS3 SSI1 SSI3 STAT1 STAT3 STAT5 STAT5A STAT5B SYK TCEB1 TCEB2 TIP3 TYK2 UBA52 UBA80 UBB UBC UBC4 UBC5A UBC5B UBC5C UBCEP1 UBCEP2 UBCH4 UBCH5 UBCH5A UBCH5B UBCH5C UBE2D1 UBE2D2 UBE2D3 VACM1	Homo sapiens (human)
CREB phosphorylation	Cyclic AMP-dependent transcription factor ATF-1 MAP kinase-activated protein kinase 2 Ribosomal protein S6 kinase alpha-1 Ribosomal protein S6 kinase alpha-2 Ribosomal protein S6 kinase alpha-3 Ribosomal protein S6 kinase alpha-5	O75582 P18846 P49137 P51812 Q15349 Q15418	ATF1 ISPK1 MAPKAPK1A MAPKAPK1B MAPKAPK1C MAPKAPK2 MSK1 RPS6KA1 RPS6KA2 RPS6KA3 RPS6KA5 RSK1 RSK2 RSK3	Homo sapiens (human)
Activation of the AP-1 family of transcription factors	Cyclic AMP-dependent transcription factor ATF-2 Mitogen-activated protein kinase 10 Mitogen-activated protein kinase 11 Mitogen-activated protein kinase 14 Mitogen-activated protein kinase 1 Mitogen-activated protein kinase 3 Mitogen-activated protein kinase 8 Mitogen-activated protein kinase 9 Protein c-Fos Transcription factor Jun	P01100 P05412 P15336 P27361 P28482 P45983 P45984 P53779 Q15759 Q16539	ATF2 CREB2 CREBP1 CSBP CSBP1 CSBP2 CSPB1 ERK1 ERK2 FOS G0S7 JNK1 JNK2 JNK3 JNK3A JUN MAPK1 MAPK10 MAPK11 MAPK14 MAPK3 MAPK8 MAPK9 MXI2 PRKM1 PRKM10 PRKM11 PRKM2 PRKM3 PRKM8 PRKM9 SAPK1 SAPK1A SAPK1B SAPK1C SAPK2 SAPK2A SAPK2B	Homo sapiens (human)
PERK regulates gene expression	Cyclic AMP-dependent transcription factor ATF-4 Endoplasmic reticulum chaperone BiP Eukaryotic translation initiation factor 2 subunit 1 Eukaryotic translation initiation factor 2 subunit 2 Eukaryotic translation initiation factor 2 subunit 3 Eukaryotic translation initiation factor 2-alpha kinase 3	P05198 P11021 P18848 P20042 P41091 Q9NZJ5	ATF4 CREB2 EIF2A EIF2AK3 EIF2B EIF2G EIF2S1 EIF2S2 EIF2S3 GRP78 HSPA5 PEK PERK TXREB	Homo sapiens (human)
ATF6 (ATF6-alpha) activates chaperones	Cyclic AMP-dependent transcription factor ATF-6 alpha Endoplasmic reticulum chaperone BiP Membrane-bound transcription factor site-1 protease Membrane-bound transcription factor site-2 protease	O43462 P11021 P18850 Q14703	ATF6 GRP78 HSPA5 KIAA0091 MBTPS1 MBTPS2 S1P S2P SKI1	Homo sapiens (human)
ATF6B (ATF6-beta) activates chaperones	Cyclic AMP-dependent transcription factor ATF-6 beta Endoplasmic reticulum chaperone BiP Membrane-bound transcription factor site-1 protease Membrane-bound transcription factor site-2 protease	O43462 P11021 Q14703 Q99941	ATF6B CREBL1 G13 GRP78 HSPA5 KIAA0091 MBTPS1 MBTPS2 S1P S2P SKI1	Homo sapiens (human)
STING mediated induction of host immune responses	Cyclic GMP-AMP synthase E3 ubiquitin-protein ligase TRIM21 Gamma-interferon-inducible protein 16 Probable ATP-dependent RNA helicase DDX41 Stimulator of interferon genes protein	P19474 Q16666 Q86WV6 Q8N884 Q9UJV9	ABS C6orf150 CGAS DDX41 ERIS IFI16 IFNGIP1 MB21D1 MITA RNF81 RO52 SSA1 STING STING1 TMEM173 TRIM21	Homo sapiens (human)
Activation of the phototransduction cascade	Cyclic nucleotide-gated channel alpha-1 Cyclic nucleotide-gated channel beta-1 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 Guanine nucleotide-binding protein G(T) subunit gamma-T1 Guanine nucleotide-binding protein G(t) subunit alpha-1 Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma Rhodopsin Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta S-arrestin Sodium/potassium/calcium exchanger 1	O60721 P08100 P10523 P11488 P16499 P18545 P29973 P35913 P62873 P63211 Q14028	CNCG CNCG1 CNCG2 CNCG3L CNCG4 CNGA1 CNGB1 GNAT1 GNATR GNB1 GNGT1 KIAA0702 NCKX1 OPN2 PDE6A PDE6B PDE6G PDEA PDEB PDEG RCNC2 RHO SAG SLC24A1	Homo sapiens (human)
Phosphorylation of proteins involved in the G2/M transition by Cyclin A:Cdc2 complexes	Cyclin-A1 Cyclin-A2 Cyclin-dependent kinase 1	P06493 P20248 P78396	CCN1 CCNA CCNA1 CCNA2 CDC2 CDC28A CDK1 CDKN1 P34CDC2	Homo sapiens (human)
p53-Dependent G1 DNA Damage Response	Cyclin-A1 Cyclin-A2 Cyclin-dependent kinase 2 Cyclin-dependent kinase inhibitor 1 Cyclin-dependent kinase inhibitor 1B G1/S-specific cyclin-E1 G1/S-specific cyclin-E2	O96020 P20248 P24864 P24941 P38936 P46527 P78396	CAP20 CCN1 CCNA CCNA1 CCNA2 CCNE CCNE1 CCNE2 CDK2 CDKN1 CDKN1A CDKN1B CDKN2 CIP1 KIP1 MDA6 PIC1 SDI1 WAF1 p27	Homo sapiens (human)
G0 and Early G1	Cyclin-A1 Cyclin-A2 Cyclin-dependent kinase 2 Dual specificity tyrosine-phosphorylation-regulated kinase 1A G1/S-specific cyclin-E1 G1/S-specific cyclin-E2 Histone deacetylase 1 Histone-binding protein RBBP4 Protein lin-37 homolog Protein lin-52 homolog Protein lin-54 homolog Protein lin-9 homolog Retinoblastoma-like protein 1 Retinoblastoma-like protein 2 Transcription factor Dp-1 Transcription factor Dp-2 Transcription factor E2F4 Transcription factor E2F5	O96020 P20248 P24864 P24941 P28749 P78396 Q08999 Q09028 Q13547 Q13627 Q14186 Q14188 Q15329 Q16254 Q52LA3 Q5TKA1 Q6MZP7 Q96GY3	BARA C14orf46 CCN1 CCNA CCNA1 CCNA2 CCNE CCNE1 CCNE2 CDK2 CDKN2 CXCDC1 DP1 DP2 DYRK DYRK1A E2F4 E2F5 HDAC1 KIAA2037 LIN37 LIN52 LIN54 LIN9 MNB MNBH RB2 RBAP48 RBBP4 RBL1 RBL2 RPD3L1 TFDP1 TFDP2 TGS	Homo sapiens (human)
G2 Phase	Cyclin-A1 Cyclin-A2 Cyclin-dependent kinase 2 Transcription factor E2F1 Transcription factor E2F3	O00716 P20248 P24941 P78396 Q01094	CCN1 CCNA CCNA1 CCNA2 CDK2 CDKN2 E2F1 E2F3 KIAA0075 RBBP3	Homo sapiens (human)
Transcription of E2F targets under negative control by p107 (RBL1) and p130 (RBL2) in complex with HDAC1	Cyclin-A2 Cyclin-dependent kinase 1 Histone deacetylase 1 Histone-binding protein RBBP4 Myb-related protein B Protein lin-37 homolog Protein lin-52 homolog Protein lin-54 homolog Protein lin-9 homolog Retinoblastoma-like protein 1 Retinoblastoma-like protein 2 Transcription factor Dp-1 Transcription factor Dp-2 Transcription factor E2F1 Transcription factor E2F4 Transcription factor E2F5	P06493 P10244 P20248 P28749 Q01094 Q08999 Q09028 Q13547 Q14186 Q14188 Q15329 Q16254 Q52LA3 Q5TKA1 Q6MZP7 Q96GY3	BARA BMYB C14orf46 CCN1 CCNA CCNA2 CDC2 CDC28A CDK1 CDKN1 CXCDC1 DP1 DP2 E2F1 E2F4 E2F5 HDAC1 KIAA2037 LIN37 LIN52 LIN54 LIN9 MYBL2 P34CDC2 RB2 RBAP48 RBBP3 RBBP4 RBL1 RBL2 RPD3L1 TFDP1 TFDP2 TGS	Homo sapiens (human)
Generic Transcription Pathway	Cyclin-C Cyclin-dependent kinase 8 Endothelial zinc finger protein induced by tumor necrosis factor alpha Histone-lysine N-methyltransferase PRDM7 KRAB domain-containing protein 4 KRAB domain-containing protein 5 Mediator of RNA polymerase II transcription subunit 10 Mediator of RNA polymerase II transcription subunit 12 Mediator of RNA polymerase II transcription subunit 13 Mediator of RNA polymerase II transcription subunit 14 Mediator of RNA polymerase II transcription subunit 15 Mediator of RNA polymerase II transcription subunit 16 Mediator of RNA polymerase II transcription subunit 17 Mediator of RNA polymerase II transcription subunit 1 Mediator of RNA polymerase II transcription subunit 20 Mediator of RNA polymerase II transcription subunit 23 Mediator of RNA polymerase II transcription subunit 24 Mediator of RNA polymerase II transcription subunit 25 Mediator of RNA polymerase II transcription subunit 26 Mediator of RNA polymerase II transcription subunit 27 Mediator of RNA polymerase II transcription subunit 30 Mediator of RNA polymerase II transcription subunit 31 Mediator of RNA polymerase II transcription subunit 4 Mediator of RNA polymerase II transcription subunit 6 Mediator of RNA polymerase II transcription subunit 7 Mediator of RNA polymerase II transcription subunit 8 Neurotrophin receptor-interacting factor homolog Protein KRBA1 Protein ZNF767 Putative zinc finger protein 702 Putative zinc finger protein 705EP Putative zinc finger protein 705G Putative zinc finger protein 726P1 Putative zinc finger protein 727 Putative zinc finger protein 730 Putative zinc finger protein 735 Putative zinc finger protein 75C Putative zinc finger protein 840 Transcription intermediary factor 1-beta Transcriptional repressor RHIT Zinc finger and SCAN domain-containing protein 25 Zinc finger and SCAN domain-containing protein 32 Zinc finger imprinted 2 Zinc finger imprinted 3 Zinc finger protein 1 homolog Zinc finger protein 100 Zinc finger protein 101 Zinc finger protein 10 Zinc finger protein 112 Zinc finger protein 114 Zinc finger protein 124 Zinc finger protein 12 Zinc finger protein 133 Zinc finger protein 135 Zinc finger protein 136 Zinc finger protein 138 Zinc finger protein 14 homolog Zinc finger protein 140 Zinc finger protein 141 Zinc finger protein 14 Zinc finger protein 154 Zinc finger protein 155 Zinc finger protein 157 Zinc finger protein 160 Zinc finger protein 169 Zinc finger protein 175 Zinc finger protein 17 Zinc finger protein 180 Zinc finger protein 184 Zinc finger protein 189 Zinc finger protein 18 Zinc finger protein 195 Zinc finger protein 197 Zinc finger protein 19 Zinc finger protein 200 Zinc finger protein 202 Zinc finger protein 208 Zinc finger protein 20 Zinc finger protein 211 Zinc finger protein 212 Zinc finger protein 213 Zinc finger protein 214 Zinc finger protein 215 Zinc finger protein 221 Zinc finger protein 222 Zinc finger protein 223 Zinc finger protein 224 Zinc finger protein 225 Zinc finger protein 226 Zinc finger protein 227 Zinc finger protein 230 Zinc finger protein 233 Zinc finger protein 234 Zinc finger protein 235 Zinc finger protein 23 Zinc finger protein 248 Zinc finger protein 250 Zinc finger protein 253 Zinc finger protein 254 Zinc finger protein 256 Zinc finger protein 257 Zinc finger protein 25 Zinc finger protein 263 Zinc finger protein 264 Zinc finger protein 266 Zinc finger protein 267 Zinc finger protein 268 Zinc finger protein 26 Zinc finger protein 273 Zinc finger protein 28 homolog Zinc finger protein 282 Zinc finger protein 285 Zinc finger protein 286A Zinc finger protein 287 Zinc finger protein 28 Zinc finger protein 2 Zinc finger protein 30 homolog Zinc finger protein 300 Zinc finger protein 302 Zinc finger protein 304 Zinc finger protein 30 Zinc finger protein 311 Zinc finger protein 317 Zinc finger protein 320 Zinc finger protein 324A Zinc finger protein 324B Zinc finger protein 331 Zinc finger protein 333 Zinc finger protein 334 Zinc finger protein 337 Zinc finger protein 33A Zinc finger protein 33B Zinc finger protein 343 Zinc finger protein 347 Zinc finger protein 34 Zinc finger protein 350 Zinc finger protein 354A Zinc finger protein 354B Zinc finger protein 354C Zinc finger protein 37 homolog Zinc finger protein 37A Zinc finger protein 382 Zinc finger protein 383 Zinc finger protein 394 Zinc finger protein 398 Zinc finger protein 3 Zinc finger protein 415 Zinc finger protein 416 Zinc finger protein 417 Zinc finger protein 418 Zinc finger protein 419 Zinc finger protein 41 Zinc finger protein 420 Zinc finger protein 425 Zinc finger protein 426 Zinc finger protein 429 Zinc finger protein 430 Zinc finger protein 431 Zinc finger protein 432 Zinc finger protein 433 Zinc finger protein 436 Zinc finger protein 439 Zinc finger protein 43 Zinc finger protein 440 Zinc finger protein 441 Zinc finger protein 442 Zinc finger protein 443 Zinc finger protein 445 Zinc finger protein 446 Zinc finger protein 454 Zinc finger protein 45 Zinc finger protein 460 Zinc finger protein 461 Zinc finger protein 468 Zinc finger protein 470 Zinc finger protein 471 Zinc finger protein 473 Zinc finger protein 479 Zinc finger protein 480 Zinc finger protein 483 Zinc finger protein 484 Zinc finger protein 485 Zinc finger protein 486 Zinc finger protein 490 Zinc finger protein 492 Zinc finger protein 493 Zinc finger protein 496 Zinc finger protein 500 Zinc finger protein 506 Zinc finger protein 510 Zinc finger protein 514 Zinc finger protein 517 Zinc finger protein 519 Zinc finger protein 528 Zinc finger protein 529 Zinc finger protein 530 Zinc finger protein 540 Zinc finger protein 543 Zinc finger protein 544 Zinc finger protein 546 Zinc finger protein 547 Zinc finger protein 548 Zinc finger protein 549 Zinc finger protein 550 Zinc finger protein 551 Zinc finger protein 552 Zinc finger protein 554 Zinc finger protein 555 Zinc finger protein 556 Zinc finger protein 557 Zinc finger protein 558 Zinc finger protein 559 Zinc finger protein 560 Zinc finger protein 561 Zinc finger protein 562 Zinc finger protein 563 Zinc finger protein 564 Zinc finger protein 565 Zinc finger protein 566 Zinc finger protein 567 Zinc finger protein 568 Zinc finger protein 569 Zinc finger protein 570 Zinc finger protein 571 Zinc finger protein 573 Zinc finger protein 577 Zinc finger protein 582 Zinc finger protein 583 Zinc finger protein 584 Zinc finger protein 585A Zinc finger protein 585B Zinc finger protein 586 Zinc finger protein 587 Zinc finger protein 589 Zinc finger protein 595 Zinc finger protein 596 Zinc finger protein 597 Zinc finger protein 599 Zinc finger protein 600 Zinc finger protein 605 Zinc finger protein 606 Zinc finger protein 607 Zinc finger protein 610 Zinc finger protein 611 Zinc finger protein 613 Zinc finger protein 614 Zinc finger protein 615 Zinc finger protein 616 Zinc finger protein 619 Zinc finger protein 620 Zinc finger protein 621 Zinc finger protein 624 Zinc finger protein 625 Zinc finger protein 626 Zinc finger protein 627 Zinc finger protein 641 Zinc finger protein 649 Zinc finger protein 655 Zinc finger protein 658 Zinc finger protein 658B Zinc finger protein 660 Zinc finger protein 662 Zinc finger protein 664 Zinc finger protein 665 Zinc finger protein 667 Zinc finger protein 668 Zinc finger protein 669 Zinc finger protein 670 Zinc finger protein 671 Zinc finger protein 675 Zinc finger protein 676 Zinc finger protein 677 Zinc finger protein 678 Zinc finger protein 679 Zinc finger protein 680 Zinc finger protein 681 Zinc finger protein 682 Zinc finger protein 684 Zinc finger protein 688 Zinc finger protein 689 Zinc finger protein 69 homolog B Zinc finger protein 69 homolog Zinc finger protein 691 Zinc finger protein 692 Zinc finger protein 696 Zinc finger protein 697 Zinc finger protein 699 Zinc finger protein 700 Zinc finger protein 701 Zinc finger protein 703 Zinc finger protein 704 Zinc finger protein 705A Zinc finger protein 705D Zinc finger protein 706 Zinc finger protein 707 Zinc finger protein 708 Zinc finger protein 709 Zinc finger protein 70 Zinc finger protein 710 Zinc finger protein 711 Zinc finger protein 713 Zinc finger protein 714 Zinc finger protein 716 Zinc finger protein 717 Zinc finger protein 718 Zinc finger protein 721 Zinc finger protein 724 Zinc finger protein 726 Zinc finger protein 729 Zinc finger protein 732 Zinc finger protein 736 Zinc finger protein 737 Zinc finger protein 738 Zinc finger protein 740 Zinc finger protein 746 Zinc finger protein 747 Zinc finger protein 749 Zinc finger protein 74 Zinc finger protein 750 Zinc finger protein 75A Zinc finger protein 75D Zinc finger protein 761 Zinc finger protein 764 Zinc finger protein 770 Zinc finger protein 771 Zinc finger protein 772 Zinc finger protein 773 Zinc finger protein 774 Zinc finger protein 775 Zinc finger protein 776 Zinc finger protein 777 Zinc finger protein 778 Zinc finger protein 77 Zinc finger protein 782 Zinc finger protein 785 Zinc finger protein 786 Zinc finger protein 790 Zinc finger protein 791 Zinc finger protein 792 Zinc finger protein 793 Zinc finger protein 799 Zinc finger protein 79 Zinc finger protein 804B Zinc finger protein 839 Zinc finger protein 860 Zinc finger protein 875 Zinc finger protein 90 homolog Zinc finger protein 92 Zinc finger protein 99 Zinc finger protein ZFP2 Zinc finger protein interacting with ribonucleoprotein K Zinc finger protein with KRAB and SCAN domains 1 Zinc finger protein with KRAB and SCAN domains 3 Zinc finger protein with KRAB and SCAN domains 4 Zinc finger protein with KRAB and SCAN domains 5 Zinc finger protein with KRAB and SCAN domains 7 Zinc finger protein with KRAB and SCAN domains 8	A2RRD8 A4D1E1 A5PL33 A6NDX5 A6NHJ4 A6NK53 A6NN14 A6NNF4 A6NP11 A8K0R7 A8K8V0 A8MTY0 A8MUV8 A8MUZ8 A8MWA4 A8MXY4 B4DX44 B4DXR9 O14628 O14709 O14771 O14978 O43296 O43345 O43361 O43513 O60244 O60304 O60765 O75346 O75373 O75437 O75448 O75467 O75586 O75820 O94892 O95125 O95201 O95402 O95780 P0C7X2 P0CB33 P0CH99 P10072 P15622 P17014 P17017 P17019 P17021 P17022 P17023 P17024 P17027 P17029 P17030 P17031 P17032 P17035 P17036 P17038 P17039 P21506 P24863 P49336 P51786 P51814 P51815 P52736 P52737 P52738 P52742 P52744 P59923 P98182 Q02386 Q03936 Q06730 Q06732 Q08AN1 Q08ER8 Q09FC8 Q12901 Q13106 Q13263 Q13398 Q14584 Q14586 Q14587 Q14588 Q14590 Q14592 Q14593 Q14929 Q15648 Q15776 Q15928 Q15935 Q15937 Q15940 Q15973 Q16587 Q32M78 Q32MQ0 Q3KP31 Q3KQV3 Q3MIS6 Q3SXZ3 Q3SY52 Q3ZCX4 Q49AA0 Q4V348 Q52M93 Q53GI3 Q5HYK9 Q5JNZ3 Q5JUW0 Q5JVG2 Q5JVG8 Q5MCW4 Q5SXM1 Q5T5D7 Q5TEC3 Q5TYW1 Q5VIY5 Q5VV52 Q68DI1 Q68DY1 Q68DY9 Q6AW86 Q6AZW8 Q6ECI4 Q6IQ21 Q6IV72 Q6NSZ9 Q6NUN9 Q6NX45 Q6NX49 Q6P1L6 Q6P280 Q6P2C8 Q6P2D0 Q6P3V2 Q6P9A1 Q6P9A3 Q6PF04 Q6PG37 Q6PK81 Q6V9R5 Q6ZMV8 Q6ZMW2 Q6ZMY9 Q6ZN11 Q6ZN57 Q6ZN79 Q6ZNC4 Q6ZNG0 Q6ZNG1 Q6ZR52 Q6ZS27 Q6ZSS3 Q71SY5 Q75MW2 Q7L3S4 Q7L945 Q7Z2F6 Q7Z340 Q7Z398 Q7Z3V5 Q86T29 Q86TJ5 Q86UE3 Q86UQ0 Q86V71 Q86WZ6 Q86XN6 Q86XU0 Q86Y25 Q86YE8 Q8IVC4 Q8IVP9 Q8IYB9 Q8IYI8 Q8IYN0 Q8IYX0 Q8IZ26 Q8IZC7 Q8N184 Q8N1W2 Q8N2I2 Q8N393 Q8N3J9 Q8N587 Q8N720 Q8N7K0 Q8N7Q3 Q8N823 Q8N859 Q8N883 Q8N8J6 Q8N8Z8 Q8N972 Q8N988 Q8N9F8 Q8N9K5 Q8N9Z0 Q8NA42 Q8NC26 Q8NCK3 Q8NDP4 Q8NDQ6 Q8NDW4 Q8NDX6 Q8NE65 Q8NEK5 Q8NEM1 Q8NEP9 Q8NHY6 Q8TA94 Q8TAF7 Q8TAQ5 Q8TAU3 Q8TAW3 Q8TB69 Q8TBZ8 Q8TC21 Q8TD17 Q8TD23 Q8TF20 Q8TF32 Q8TF39 Q8TF45 Q8TF47 Q8WTR7 Q8WV37 Q8WXB4 Q92670 Q93074 Q969J2 Q969W8 Q96BR6 Q96BV0 Q96C28 Q96CS4 Q96G25 Q96GC6 Q96GE5 Q96H40 Q96H86 Q96HQ0 Q96HR3 Q96I27 Q96IT1 Q96JC4 Q96JL9 Q96K58 Q96K75 Q96LW1 Q96LX8 Q96MR9 Q96MU6 Q96N20 Q96N22 Q96N38 Q96N77 Q96ND8 Q96NG5 Q96NG8 Q96NI8 Q96NJ3 Q96NL3 Q96PE6 Q96PQ6 Q96RE9 Q96RN5 Q96SE7 Q96SK3 Q96SQ5 Q96SR6 Q99676 Q9BR84 Q9BRR0 Q9BS31 Q9BS34 Q9BSG1 Q9BSK1 Q9BTT4 Q9BU19 Q9BUY5 Q9BV97 Q9BWM5 Q9BX82 Q9BY31 Q9C0F3 Q9GZX5 Q9H0M5 Q9H707 Q9H7R0 Q9H7R5 Q9H7S9 Q9H7X3 Q9H8G1 Q9H944 Q9H963 Q9HAH1 Q9HBT7 Q9HBT8 Q9HCG1 Q9HCL3 Q9HCX3 Q9HCZ1 Q9NPJ6 Q9NQW5 Q9NQX6 Q9NQZ8 Q9NR11 Q9NV72 Q9NVC6 Q9NWS9 Q9NX65 Q9NXT0 Q9NYT6 Q9NZL3 Q9NZV7 Q9P0L1 Q9P255 Q9P2J8 Q9UC06 Q9UDV6 Q9UDV7 Q9UHV7 Q9UIE0 Q9UJL9 Q9UJU3 Q9UJW8 Q9UK10 Q9UK11 Q9UK12 Q9UK13 Q9UL58 Q9UL59 Q9ULD5 Q9ULK4 Q9ULM2 Q9Y2A4 Q9Y2G7 Q9Y2H8 Q9Y2L8 Q9Y2P7 Q9Y2Q1 Q9Y2X0 Q9Y3C7 Q9Y3M9 Q9Y462 Q9Y473 Q9Y5V0 Q9Y6Q3	ACID1 ARC100 ARC105 ARC130 ARC150 ARC205 ARC240 ARC250 ARC33 ARC34 ARC36 ARC70 ARC77 ARC92 AREBP BAZ1 BAZ2 BMZF1 BMZF2 BMZF3 BMZF4 BMZF5 C14orf131 C19orf9 C20orf157 CAGH45 CCNC CDK8 CMPX1 CRSP1 CRSP2 CRSP200 CRSP3 CRSP34 CRSP4 CRSP6 CRSP7 CRSP8 CRSP9 CTG7A CXorf4 CZF1 D4S90 DRIP100 DRIP130 DRIP150 DRIP205 DRIP230 DRIP36 DRIP77 DRIP80 DRIP92 ERP1 EXLM1 EZFIT EZNF FDZF2 FPM315 GIOT1 GIOT3 GIOT4 HDSG1 HKL1 HKR1 HOPA HUB1 KAP1 KIAA0065 KIAA0130 KIAA0192 KIAA0412 KIAA0557 KIAA0593 KIAA0798 KIAA0961 KIAA0972 KIAA1015 KIAA1141 KIAA1198 KIAA1216 KIAA1285 KIAA1339 KIAA1349 KIAA1396 KIAA1431 KIAA1473 KIAA1508 KIAA1559 KIAA1588 KIAA1611 KIAA1615 KIAA1710 KIAA1806 KIAA1827 KIAA1852 KIAA1862 KIAA1874 KIAA1947 KIAA1954 KIAA1956 KIAA1962 KIAA1969 KIAA1982 KIAA2003 KIAA2007 KIAA2033 KID3 KOX1 KOX10 KOX11 KOX12 KOX13 KOX16 KOX18 KOX19 KOX2 KOX20 KOX21 KOX22 KOX23 KOX24 KOX25 KOX27 KOX28 KOX3 KOX31 KOX32 KOX5 KOX6 KOX8 KRBA1 KRBO2 KRBOX4 KRBOX5 MED1 MED10 MED12 MED13 MED14 MED15 MED16 MED17 MED20 MED23 MED24 MED25 MED26 MED27 MED30 MED31 MED4 MED6 MED7 MED8 PARIS PBP PCQAP PFM4 PPARBP PPARGBP PRDM7 PTOV2 RB18A RGR1 RHIT RITA RNF96 SOH1 SUR2 SZF1 TB7 TCF17 THRAP1 THRAP4 THRAP5 THRAP6 TIF1B TIG1 TIZ TNRC11 TNRC7 TRAP100 TRAP170 TRAP220 TRAP230 TRAP240 TRAP25 TRAP80 TRFP TRIM28 TRIP2 VDRIP VIK ZBRK1 ZEPPO1 ZER6 ZFOC1 ZFP1 ZFP100 ZFP112 ZFP14 ZFP160L ZFP2 ZFP28 ZFP30 ZFP31 ZFP37 ZFP445 ZFP47 ZFP69 ZFP692 ZFP69B ZFP90 ZFP93 ZFP95 ZIK1 ZIM2 ZIM3 ZKSCAN1 ZKSCAN10 ZKSCAN11 ZKSCAN12 ZKSCAN13 ZKSCAN14 ZKSCAN15 ZKSCAN16 ZKSCAN17 ZKSCAN18 ZKSCAN19 ZKSCAN20 ZKSCAN21 ZKSCAN3 ZKSCAN4 ZKSCAN5 ZKSCAN6 ZKSCAN7 ZKSCAN8 ZKSCAN9 ZNF10 ZNF100 ZNF101 ZNF102 ZNF11 ZNF1111 ZNF112 ZNF114 ZNF115 ZNF11A ZNF11B ZNF12 ZNF124 ZNF13 ZNF133 ZNF135 ZNF135L ZNF136 ZNF138 ZNF139 ZNF14 ZNF140 ZNF140L ZNF141 ZNF15 ZNF150 ZNF154 ZNF155 ZNF157 ZNF15L1 ZNF160 ZNF166 ZNF167 ZNF168 ZNF169 ZNF17 ZNF175 ZNF176 ZNF18 ZNF180 ZNF184 ZNF189 ZNF19 ZNF192 ZNF195 ZNF197 ZNF2 ZNF20 ZNF200 ZNF202 ZNF205 ZNF208 ZNF210 ZNF211 ZNF212 ZNF213 ZNF214 ZNF215 ZNF221 ZNF222 ZNF223 ZNF224 ZNF225 ZNF226 ZNF227 ZNF228 ZNF23 ZNF230 ZNF233 ZNF234 ZNF235 ZNF248 ZNF25 ZNF250 ZNF253 ZNF254 ZNF255 ZNF256 ZNF257 ZNF26 ZNF263 ZNF264 ZNF266 ZNF267 ZNF268 ZNF269 ZNF27 ZNF270 ZNF272 ZNF273 ZNF274 ZNF28 ZNF282 ZNF285 ZNF285A ZNF286 ZNF286A ZNF287 ZNF3 ZNF30 ZNF300 ZNF302 ZNF304 ZNF306 ZNF307 ZNF309 ZNF311 ZNF317 ZNF320 ZNF324 ZNF324A ZNF324B ZNF325 ZNF327 ZNF328 ZNF33 ZNF331 ZNF333 ZNF334 ZNF337 ZNF33A ZNF33B ZNF34 ZNF343 ZNF347 ZNF350 ZNF354A ZNF354B ZNF354C ZNF359 ZNF36 ZNF361 ZNF37 ZNF37A ZNF382 ZNF383 ZNF39 ZNF394 ZNF398 ZNF39L1 ZNF41 ZNF411 ZNF415 ZNF416 ZNF417 ZNF418 ZNF419 ZNF419A ZNF419B ZNF420 ZNF425 ZNF426 ZNF427 ZNF429 ZNF43 ZNF430 ZNF431 ZNF432 ZNF433 ZNF434 ZNF436 ZNF439 ZNF440 ZNF441 ZNF442 ZNF443 ZNF445 ZNF446 ZNF448 ZNF45 ZNF454 ZNF460 ZNF461 ZNF463 ZNF468 ZNF470 ZNF471 ZNF473 ZNF475 ZNF479 ZNF480 ZNF483 ZNF484 ZNF485 ZNF486 ZNF49 ZNF490 ZNF492 ZNF493 ZNF496 ZNF498 ZNF500 ZNF506 ZNF510 ZNF514 ZNF517 ZNF519 ZNF520 ZNF528 ZNF529 ZNF530 ZNF531 ZNF535 ZNF539 ZNF540 ZNF543 ZNF544 ZNF546 ZNF547 ZNF548 ZNF549 ZNF550 ZNF551 ZNF552 ZNF554 ZNF555 ZNF556 ZNF557 ZNF558 ZNF559 ZNF560 ZNF561 ZNF562 ZNF563 ZNF564 ZNF565 ZNF566 ZNF567 ZNF568 ZNF569 ZNF570 ZNF571 ZNF573 ZNF577 ZNF582 ZNF583 ZNF584 ZNF585A ZNF585B ZNF586 ZNF587 ZNF589 ZNF595 ZNF596 ZNF597 ZNF599 ZNF6 ZNF600 ZNF605 ZNF606 ZNF607 ZNF61 ZNF610 ZNF611 ZNF612 ZNF613 ZNF614 ZNF615 ZNF616 ZNF619 ZNF620 ZNF621 ZNF624 ZNF625 ZNF626 ZNF627 ZNF64 ZNF641 ZNF642 ZNF643 ZNF647 ZNF649 ZNF655 ZNF656 ZNF657 ZNF658 ZNF658B ZNF660 ZNF661 ZNF662 ZNF664 ZNF665 ZNF667 ZNF668 ZNF669 ZNF67 ZNF670 ZNF671 ZNF673 ZNF675 ZNF676 ZNF677 ZNF678 ZNF679 ZNF67P ZNF680 ZNF681 ZNF682 ZNF684 ZNF688 ZNF689 ZNF691 ZNF692 ZNF696 ZNF697 ZNF699 ZNF70 ZNF700 ZNF701 ZNF702 ZNF702P ZNF703 ZNF704 ZNF705A ZNF705D ZNF705E ZNF705EP ZNF705G ZNF706 ZNF707 ZNF708 ZNF709 ZNF71 ZNF710 ZNF711 ZNF713 ZNF714 ZNF716 ZNF717 ZNF718 ZNF720 ZNF721 ZNF724 ZNF724P ZNF726 ZNF726P1 ZNF727 ZNF727P ZNF729 ZNF730 ZNF732 ZNF735 ZNF735P ZNF736 ZNF737 ZNF738 ZNF74 ZNF740 ZNF745 ZNF746 ZNF747 ZNF749 ZNF75 ZNF750 ZNF751 ZNF756 ZNF75A ZNF75C ZNF75CP ZNF75D ZNF761 ZNF762 ZNF764 ZNF767 ZNF767P ZNF77 ZNF770 ZNF771 ZNF772 ZNF773 ZNF774 ZNF775 ZNF776 ZNF777 ZNF778 ZNF782 ZNF785 ZNF786 ZNF78L1 ZNF79 ZNF790 ZNF791 ZNF792 ZNF793 ZNF799 ZNF804B ZNF82 ZNF839 ZNF840 ZNF840P ZNF842 ZNF860 ZNF875 ZNF91L ZNF92 ZNF99 ZNFC150 ZNFMF ZNFP104 ZPO1 ZSCAN13 ZSCAN25 ZSCAN32	Homo sapiens (human)
RNA polymerase II transcribes snRNA genes	Cyclin-K Cyclin-T1 Cyclin-T2 Cyclin-dependent kinase 7 Cyclin-dependent kinase 9 DNA-directed RNA polymerase II subunit RPB11-a DNA-directed RNA polymerase II subunit RPB1 DNA-directed RNA polymerase II subunit RPB2 DNA-directed RNA polymerase II subunit RPB3 DNA-directed RNA polymerase II subunit RPB4 DNA-directed RNA polymerase II subunit RPB7 DNA-directed RNA polymerase II subunit RPB9 DNA-directed RNA polymerases I, II, and III subunit RPABC1 DNA-directed RNA polymerases I, II, and III subunit RPABC2 DNA-directed RNA polymerases I, II, and III subunit RPABC3 DNA-directed RNA polymerases I, II, and III subunit RPABC4 DNA-directed RNA polymerases I, II, and III subunit RPABC5 General transcription factor IIE subunit 1 General transcription factor IIF subunit 1 General transcription factor IIF subunit 2 Integrator complex subunit 10 Integrator complex subunit 11 Integrator complex subunit 12 Integrator complex subunit 13 Integrator complex subunit 14 Integrator complex subunit 1 Integrator complex subunit 2 Integrator complex subunit 3 Integrator complex subunit 4 Integrator complex subunit 5 Integrator complex subunit 6 Integrator complex subunit 7 Integrator complex subunit 8 Integrator complex subunit 9 Little elongation complex subunit 1 Little elongation complex subunit 2 Nuclear cap-binding protein subunit 1 Nuclear cap-binding protein subunit 2 POU domain, class 2, transcription factor 1 POU domain, class 2, transcription factor 2 Phosphorylated adapter RNA export protein Pre-mRNA cleavage complex 2 protein Pcf11 Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 RNA polymerase II elongation factor ELL2 RNA polymerase II elongation factor ELL3 RNA polymerase II elongation factor ELL RNA polymerase II subunit A C-terminal domain phosphatase SSU72 Regulation of nuclear pre-mRNA domain-containing protein 1A Regulation of nuclear pre-mRNA domain-containing protein 1B Regulation of nuclear pre-mRNA domain-containing protein 2 SOSS complex subunit B1 SOSS complex subunit B2 Serrate RNA effector molecule homolog TATA-box-binding protein Transcription elongation factor SPT4 Transcription elongation factor SPT5 Transcription factor Sp1 Transcription initiation factor IIA subunit 1 Transcription initiation factor IIA subunit 2 Transcription initiation factor IIB Transcription initiation factor IIE subunit beta Transcription initiation factor TFIID subunit 11 Transcription initiation factor TFIID subunit 13 Transcription initiation factor TFIID subunit 5 Transcription initiation factor TFIID subunit 6 Transcription initiation factor TFIID subunit 8 Transcription initiation factor TFIID subunit 9 Zinc finger CCCH domain-containing protein 8 Zinc finger protein 143 snRNA-activating protein complex subunit 1 snRNA-activating protein complex subunit 2 snRNA-activating protein complex subunit 3 snRNA-activating protein complex subunit 4 snRNA-activating protein complex subunit 5	O00267 O00472 O15514 O60563 O60583 O75909 O75971 O94913 P08047 P09086 P13984 P14859 P19387 P19388 P20226 P24928 P29083 P29084 P30876 P35269 P36954 P49848 P50613 P50750 P52298 P52434 P52435 P52655 P52657 P52747 P53803 P55199 P61218 P62487 P62875 P63272 Q00403 Q09161 Q13487 Q15542 Q15543 Q15544 Q16533 Q16594 Q5SXM2 Q5TA45 Q5VT52 Q659A1 Q68E01 Q6P9B9 Q75QN2 Q7Z7C8 Q8IXW5 Q8N201 Q8N5P1 Q92966 Q96AH0 Q96CB8 Q96HW7 Q96P16 Q96SY0 Q9BQ15 Q9BXP5 Q9H0H0 Q9H814 Q9HB65 Q9NP77 Q9NQG5 Q9NV88 Q9NVH2 Q9NVM9 Q9NVR2 Q9UL03 Q9Y2F5	ARS2 ASR2 ASUN BRCC1 C12orf11 C15orf44 C19orf17 C1orf193 C1orf60 C1orf73 C1orf82 C20orf77 C8orf35 C8orf52 CAK CAK1 CBP20 CBP80 CCNK CCNT1 CCNT2 CDC2L4 CDK7 CDK9 CDKN7 CPR4 CPSF3L CREPT DBI1 DDX26 DDX26A ELL ELL2 ELL3 GCT1 GTF2A1 GTF2A2 GTF2B GTF2D1 GTF2E1 GTF2E2 GTF2F1 GTF2F2 ICE1 ICE2 INTS1 INTS10 INTS11 INTS12 INTS13 INTS14 INTS2 INTS3 INTS4 INTS5 INTS6 INTS7 INTS8 INTS9 KIAA0460 KIAA0824 KIAA0947 KIAA1287 KIAA1440 KIAA1698 MO15 NABP1 NABP2 NARG2 NCBP NCBP1 NCBP2 OBFC2A OBFC2B OCT1 OCT2 OTF1 OTF2 P15RS PCF11 PHAX PHF22 POLR2 POLR2A POLR2B POLR2C POLR2D POLR2E POLR2F POLR2G POLR2H POLR2I POLR2J POLR2J1 POLR2K POLR2L POLRF POU2F1 POU2F2 RAP30 RAP74 RC68 RC74 RNUXA RPAP2 RPB7 RPRD1A RPRD1B RPRD2 SBF SNAP19 SNAP190 SNAP43 SNAP45 SNAP50 SNAPC1 SNAPC2 SNAPC3 SNAPC4 SNAPC5 SP1 SPT4H SPT5 SPT5H SRRT SSB1 SSB2 SSU72 STAF STK1 SUPT4H SUPT4H1 SUPT5H TAF11 TAF13 TAF2D TAF2E TAF2G TAF2I TAF2K TAF5 TAF6 TAF8 TAF9 TAFII18 TAFII31 TAFII43 TAFII70 TAK TBN TBP TF2A1 TF2A2 TF2B TF2D TF2E1 TF2E2 TFIIB TFIID TSFP1 VWA9 ZC3H8 ZC3HDC8 ZNF143	Homo sapiens (human)
Pausing and recovery of HIV elongation	Cyclin-K Cyclin-T1 Cyclin-T2 Cyclin-dependent kinase 9 DNA-directed RNA polymerase II subunit RPB11-a DNA-directed RNA polymerase II subunit RPB1 DNA-directed RNA polymerase II subunit RPB2 DNA-directed RNA polymerase II subunit RPB3 DNA-directed RNA polymerase II subunit RPB4 DNA-directed RNA polymerase II subunit RPB7 DNA-directed RNA polymerase II subunit RPB9 DNA-directed RNA polymerases I, II, and III subunit RPABC1 DNA-directed RNA polymerases I, II, and III subunit RPABC2 DNA-directed RNA polymerases I, II, and III subunit RPABC3 DNA-directed RNA polymerases I, II, and III subunit RPABC4 DNA-directed RNA polymerases I, II, and III subunit RPABC5 Elongin-A2 Elongin-A Elongin-B Elongin-C FACT complex subunit SPT16 FACT complex subunit SSRP1 General transcription factor IIF subunit 1 General transcription factor IIF subunit 2 Negative elongation factor A Negative elongation factor B Negative elongation factor C/D Negative elongation factor E RNA polymerase II elongation factor ELL RNA polymerase II subunit A C-terminal domain phosphatase Transcription elongation factor A protein 1 Transcription elongation factor SPT4 Transcription elongation factor SPT5	O00267 O15514 O60563 O60583 O75909 P13984 P18615 P19387 P19388 P23193 P24928 P30876 P35269 P36954 P50750 P52434 P52435 P53803 P55199 P61218 P62487 P62875 P63272 Q08945 Q14241 Q15369 Q15370 Q8IXH7 Q8IYF1 Q8WX92 Q9H3P2 Q9Y5B0 Q9Y5B9	C19orf17 CCNK CCNT1 CCNT2 CDC2L4 CDK9 COBRA1 CPR4 CTDP1 ELL ELOA ELOA2 ELOB ELOC FACT140 FACT80 FACTP140 FCP1 GTF2F1 GTF2F2 GTF2S KIAA1182 NELFA NELFB NELFCD NELFD NELFE POLR2 POLR2A POLR2B POLR2C POLR2D POLR2E POLR2F POLR2G POLR2H POLR2I POLR2J POLR2J1 POLR2K POLR2L POLRF RAP30 RAP74 RD RDBP RPB7 SPT4H SPT5 SPT5H SSRP1 SUPT16H SUPT4H SUPT4H1 SUPT5H TAK TCEA1 TCEB1 TCEB2 TCEB3 TCEB3B TCEB3L TFIIS TH1 TH1L WHSC2	Homo sapiens (human)
HIV elongation arrest and recovery	Cyclin-K Cyclin-T1 Cyclin-T2 Cyclin-dependent kinase 9 DNA-directed RNA polymerase II subunit RPB11-a DNA-directed RNA polymerase II subunit RPB1 DNA-directed RNA polymerase II subunit RPB2 DNA-directed RNA polymerase II subunit RPB3 DNA-directed RNA polymerase II subunit RPB4 DNA-directed RNA polymerase II subunit RPB7 DNA-directed RNA polymerase II subunit RPB9 DNA-directed RNA polymerases I, II, and III subunit RPABC1 DNA-directed RNA polymerases I, II, and III subunit RPABC2 DNA-directed RNA polymerases I, II, and III subunit RPABC3 DNA-directed RNA polymerases I, II, and III subunit RPABC4 DNA-directed RNA polymerases I, II, and III subunit RPABC5 Elongin-A2 Elongin-A Elongin-B Elongin-C FACT complex subunit SPT16 FACT complex subunit SSRP1 General transcription factor IIF subunit 1 General transcription factor IIF subunit 2 Negative elongation factor A Negative elongation factor B Negative elongation factor C/D Negative elongation factor E RNA polymerase II elongation factor ELL RNA polymerase II subunit A C-terminal domain phosphatase Transcription elongation factor A protein 1 Transcription elongation factor SPT4 Transcription elongation factor SPT5	O00267 O15514 O60563 O60583 O75909 P13984 P18615 P19387 P19388 P23193 P24928 P30876 P35269 P36954 P50750 P52434 P52435 P53803 P55199 P61218 P62487 P62875 P63272 Q08945 Q14241 Q15369 Q15370 Q8IXH7 Q8IYF1 Q8WX92 Q9H3P2 Q9Y5B0 Q9Y5B9	C19orf17 CCNK CCNT1 CCNT2 CDC2L4 CDK9 COBRA1 CPR4 CTDP1 ELL ELOA ELOA2 ELOB ELOC FACT140 FACT80 FACTP140 FCP1 GTF2F1 GTF2F2 GTF2S KIAA1182 NELFA NELFB NELFCD NELFD NELFE POLR2 POLR2A POLR2B POLR2C POLR2D POLR2E POLR2F POLR2G POLR2H POLR2I POLR2J POLR2J1 POLR2K POLR2L POLRF RAP30 RAP74 RD RDBP RPB7 SPT4H SPT5 SPT5H SSRP1 SUPT16H SUPT4H SUPT4H1 SUPT5H TAK TCEA1 TCEB1 TCEB2 TCEB3 TCEB3B TCEB3L TFIIS TH1 TH1L WHSC2	Homo sapiens (human)
Tat-mediated HIV elongation arrest and recovery	Cyclin-T1 Cyclin-dependent kinase 9 DNA-directed RNA polymerase II subunit RPB11-a DNA-directed RNA polymerase II subunit RPB1 DNA-directed RNA polymerase II subunit RPB2 DNA-directed RNA polymerase II subunit RPB3 DNA-directed RNA polymerase II subunit RPB4 DNA-directed RNA polymerase II subunit RPB7 DNA-directed RNA polymerase II subunit RPB9 DNA-directed RNA polymerases I, II, and III subunit RPABC1 DNA-directed RNA polymerases I, II, and III subunit RPABC2 DNA-directed RNA polymerases I, II, and III subunit RPABC3 DNA-directed RNA polymerases I, II, and III subunit RPABC4 DNA-directed RNA polymerases I, II, and III subunit RPABC5 Elongin-A2 Elongin-A Elongin-B Elongin-C FACT complex subunit SPT16 FACT complex subunit SSRP1 General transcription factor IIF subunit 1 General transcription factor IIF subunit 2 Negative elongation factor A Negative elongation factor B Negative elongation factor C/D Negative elongation factor E Protein Tat RNA polymerase II elongation factor ELL RNA polymerase II subunit A C-terminal domain phosphatase Transcription elongation factor A protein 1 Transcription elongation factor SPT4 Transcription elongation factor SPT5	O00267 O15514 O60563 P04608 P13984 P18615 P19387 P19388 P23193 P24928 P30876 P35269 P36954 P50750 P52434 P52435 P53803 P55199 P61218 P62487 P62875 P63272 Q08945 Q14241 Q15369 Q15370 Q8IXH7 Q8IYF1 Q8WX92 Q9H3P2 Q9Y5B0 Q9Y5B9	C19orf17 CCNT1 CDC2L4 CDK9 COBRA1 CTDP1 ELL ELOA ELOA2 ELOB ELOC FACT140 FACT80 FACTP140 FCP1 GTF2F1 GTF2F2 GTF2S KIAA1182 NELFA NELFB NELFCD NELFD NELFE POLR2 POLR2A POLR2B POLR2C POLR2D POLR2E POLR2F POLR2G POLR2H POLR2I POLR2J POLR2J1 POLR2K POLR2L POLRF RAP30 RAP74 RD RDBP RPB7 SPT4H SPT5 SPT5H SSRP1 SUPT16H SUPT4H SUPT4H1 SUPT5H TAK TCEA1 TCEB1 TCEB2 TCEB3 TCEB3B TCEB3L TFIIS TH1 TH1L WHSC2 tat	Homo sapiens (human)
Pausing and recovery of Tat-mediated HIV elongation	Cyclin-T1 Cyclin-dependent kinase 9 DNA-directed RNA polymerase II subunit RPB11-a DNA-directed RNA polymerase II subunit RPB1 DNA-directed RNA polymerase II subunit RPB2 DNA-directed RNA polymerase II subunit RPB3 DNA-directed RNA polymerase II subunit RPB4 DNA-directed RNA polymerase II subunit RPB7 DNA-directed RNA polymerase II subunit RPB9 DNA-directed RNA polymerases I, II, and III subunit RPABC1 DNA-directed RNA polymerases I, II, and III subunit RPABC2 DNA-directed RNA polymerases I, II, and III subunit RPABC3 DNA-directed RNA polymerases I, II, and III subunit RPABC4 DNA-directed RNA polymerases I, II, and III subunit RPABC5 Elongin-A2 Elongin-A Elongin-B Elongin-C FACT complex subunit SPT16 FACT complex subunit SSRP1 General transcription factor IIF subunit 1 General transcription factor IIF subunit 2 Negative elongation factor A Negative elongation factor B Negative elongation factor C/D Negative elongation factor E Protein Tat RNA polymerase II elongation factor ELL RNA polymerase II subunit A C-terminal domain phosphatase Transcription elongation factor A protein 1 Transcription elongation factor SPT4 Transcription elongation factor SPT5	O00267 O15514 O60563 P04608 P13984 P18615 P19387 P19388 P23193 P24928 P30876 P35269 P36954 P50750 P52434 P52435 P53803 P55199 P61218 P62487 P62875 P63272 Q08945 Q14241 Q15369 Q15370 Q8IXH7 Q8IYF1 Q8WX92 Q9H3P2 Q9Y5B0 Q9Y5B9	C19orf17 CCNT1 CDC2L4 CDK9 COBRA1 CTDP1 ELL ELOA ELOA2 ELOB ELOC FACT140 FACT80 FACTP140 FCP1 GTF2F1 GTF2F2 GTF2S KIAA1182 NELFA NELFB NELFCD NELFD NELFE POLR2 POLR2A POLR2B POLR2C POLR2D POLR2E POLR2F POLR2G POLR2H POLR2I POLR2J POLR2J1 POLR2K POLR2L POLRF RAP30 RAP74 RD RDBP RPB7 SPT4H SPT5 SPT5H SSRP1 SUPT16H SUPT4H SUPT4H1 SUPT5H TAK TCEA1 TCEB1 TCEB2 TCEB3 TCEB3B TCEB3L TFIIS TH1 TH1L WHSC2 tat	Homo sapiens (human)
Interactions of Tat with host cellular proteins	Cyclin-T1 Cyclin-dependent kinase 9 Protein Tat	O60563 P04608 P50750	CCNT1 CDC2L4 CDK9 TAK tat	Homo sapiens (human)

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