GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 376 - 400 of 1070 in total
Pathway Name ▲ Protein Name UniProt ID Gene Symbol Organism GlyTouCan ID
Glutathione conjugation
  • AC097845.1
  • Akr1a1
  • Alr
  • Esd
  • Gst12
  • Gsta1
  • Gsta2
  • Gsta3
  • Gsta5
  • Gsta6
  • Gstk1
  • Gstm1
  • Gstm2
  • Gstm3
  • Gstm4
  • Gstm5
  • Gstm7
  • Gsto1
  • Gsto2
  • Gstp1
  • Gsts
  • Gstt1
  • Gstt2
  • Gstyc1
  • Gstyc2
  • Gstz1
  • Hpgds
  • Mgst1
  • Mgst2
  • Mgst3
  • Mgst3l1
  • Pgds
  • Ptgds2
Rattus norvegicus (Norway rat)
Glutathione synthesis and recycling
  • Botch
  • Chac1
  • Chac2
  • Cndp2
  • Gclc
  • Gclm
  • Ggct
  • Ggt
  • Ggt1
  • Ggt5
  • Ggt6
  • Ggt7
  • Ggtl3
  • Ggtla1
  • Glclc
  • Glclr
  • Gss
  • Npg7
  • Oplah
Rattus norvegicus (Norway rat)
Glycerophospholipid biosynthesis
  • Agk
  • Cpne1
  • Cpne3
  • Cpne6
  • Cpne7
Rattus norvegicus (Norway rat)
Glycerophospholipid catabolism
  • Enpp6
  • Gde1
  • Mir16
  • Pnpla6
Rattus norvegicus (Norway rat)
Glycine degradation
  • AC132020.1
  • Amt
  • Dld
  • Dlst
  • Gcsh
  • Gldc
  • Kgd4
  • Mrps36
  • Ogdh
  • Ogdhl
Rattus norvegicus (Norway rat)
Glycogen breakdown (glycogenolysis)
  • AABR07037995.1
  • Agl
  • CaMIII
  • Calm3
  • Cam3
  • Camc
  • Gaa
  • Gyg
  • Gyg1
  • Lgp
  • Pgm1
  • Phka1
  • Phka2
  • Phkb
  • Phkg
  • Phkg1
  • Phkg2
  • Pygl
  • Pygm
Rattus norvegicus (Norway rat)
Glycogen synthesis
  • Gbe1
  • Gyg
  • Gyg1
  • Gys1
  • Pgm1
  • Ppp1r3c
  • Ppp1r5
  • Ugp2
Rattus norvegicus (Norway rat)
Glycolysis
  • Adpgk
  • Aldoa
  • Aldob
  • Aldoc
  • Bpgm
  • ENSRNOG00000066746
  • Eno-2
  • Eno-3
  • Eno2
  • Eno3
  • Eno4
  • Gapd
  • Gapd-s
  • Gapdh
  • Gapdhs
  • Gapds
  • Gck
  • Gnpda1
  • Gnpda2
  • Gpi
  • Hk1
  • Hk2
  • Hk3
  • Hkdc1
  • LOC100362738
  • Pfk-l
  • Pfk-m
  • Pfkc
  • Pfkl
  • Pfkm
  • Pfkp
  • Pgam1
  • Pgam2
  • Pgk-1
  • Pgk1
  • Pgk2
  • Pgm2l1
  • Pklr
  • Pkml1
  • RGD1563601
  • Tpi1
  • Tpi1l2
Rattus norvegicus (Norway rat)
Glycoprotein hormones
  • Cga
  • Cga1
  • Fshb
  • Inha
  • Inhba
  • Inhbb
  • Inhbc
  • Inhbe
  • Lhb
  • Tshb
Rattus norvegicus (Norway rat)
Glycosphingolipid biosynthesis
  • A4galt
  • B3galnt1
  • B3galt3
  • B3galt4
  • B3gnt5
  • B4galnt1
  • B4galt5
  • B4galt6
  • Cerk
  • Cgt
  • Fta
  • Ftb
  • Fut1
  • Fut2
  • Gal3st1
  • Galgt
  • Galgt1
  • Sec1
  • Siat4b
  • Siat5
  • Siat6
  • Siat8e
  • Siat9
  • St3gal2
  • St3gal3
  • St3gal5
  • St6galnac5
  • St6galnac6
  • St8sia5
  • St8siav
  • Ugcg
  • Ugt4
  • Ugt8
Rattus norvegicus (Norway rat)
Glycosphingolipid catabolism
  • AABR07013255.1
  • Arsa
  • Arsb
  • Arse
  • Arsg
  • Arsi
  • Arsj
  • Arsk
  • Arsl
  • Asah1
  • Asah2
  • Cca1
  • Ctsa
  • Enpp7
  • Galc
  • Gba
  • Gba1
  • Gba2
  • Gba3
  • Gla
  • Glb1
  • Glb1l
  • Glb1l2
  • Glb1l3
  • Gm2a
  • Hexa
  • Hexb
  • M6pr
  • Neu1
  • Neu2
  • Neu3
  • Neu4
  • Psap
  • Sgp1
  • Smpd1
  • Smpd2
  • Smpd3
  • Smpd4
  • Sts
  • Sumf1
  • Sumf2
Rattus norvegicus (Norway rat)
Glyoxylate metabolism and glycine degradation
  • Agt1
  • Agt2
  • Agxt
  • Agxt2
  • Aldh4a1
  • Dao
  • Dao1
  • Ddo
  • Fbp-cII
  • Gnmt
  • Got2
  • Grhpr
  • Hao1
  • Hoga1
  • Hypdh
  • LOC100911156
  • Maat
  • Prodh2
Rattus norvegicus (Norway rat)
Golgi Associated Vesicle Biogenesis
  • AABR07054189.1
  • Acbd3
  • Adtb1
  • Ap1b1
  • Ap1g1
  • Ap1m1
  • Ap1m2
  • Ap1s1
  • Ap1s2
  • Ap1s3
  • Ap3b1
  • Ap3s1
  • Ap4b1
  • Ap4e1
  • Arf1
  • Arrb1
  • Bloc1s1
  • Bloc1s3
  • Bloc1s4
  • Bloc1s6
  • Bloc1s7
  • Bloc1s8
  • Calm
  • Clint1
  • Clta
  • Cltc
  • Cpd
  • Dnajc6
  • Dnm2
  • Dtnbp1
  • Dyn2
  • Fth
  • Fth1
  • Fth1-ps5
  • Ftl
  • Ftl1
  • Ftl1l2
  • Gak
  • Gcp60
  • Golgb1
  • Hip1r
  • Hsc70
  • Hsc73
  • Hspa8
  • Igf2r
  • LOC100359668
  • Napa
  • Necap1
  • Ocrl
  • Picalm
  • Pik3c2a
  • Pldn
  • Pum1
  • Rab5c
  • Sh3d19
  • Sh3d2a
  • Sh3gl2
  • Sh3p4
  • Snap
  • Snap25bp
  • Snapa
  • Snapap
  • Snapin
  • Snx2
  • Snx5
  • Snx9
  • Sort1
  • Syb2
  • Sybl1
  • Tbc1d8b
  • Tfrc
  • Tpd52
  • Tpd52l1
  • Trfr
  • Ttgn1
  • Txndc5
  • Vamp2
  • Vamp7
  • Vamp8
  • Yipf6
Rattus norvegicus (Norway rat)
Golgi Cisternae Pericentriolar Stack Reorganization
  • Blzf1
  • Erk1
  • Erk2
  • Golga2
  • Gorasp1
  • Gorasp2
  • Grasp65
  • Mapk
  • Mapk1
  • Mapk3
  • Plk
  • Plk1
  • Prkm1
  • Prkm3
  • Rab1
  • Rab1A
  • Rab1b
  • Rab2
  • Rab2a
Rattus norvegicus (Norway rat)
Growth hormone receptor signaling
  • Erk1
  • Erk2
  • Gh
  • Gh1
  • Ghr
  • Jak2
  • Lyn
  • Mapk
  • Mapk1
  • Mapk3
  • Mgf
  • Prkm1
  • Prkm3
  • Prl
  • Prlr
  • Ptpn1
  • Sh2-b
  • Sh2b1
  • Sh2bpsm1
  • Stat5a
  • Stat5b
Rattus norvegicus (Norway rat)
HATs acetylate histones
  • Atf2
  • Brd1
  • Brpf1
  • Brpf3
  • ENSRNOG00000064540
  • ENSRNOG00000066901
  • ENSRNOG00000068034
  • H2bc1
  • H2bc12l1
  • H2bc18
  • H2bc6
  • H2bcl1
  • H2bcl2
  • H2bu1
  • H3c13
  • H4c16
  • H4c2
  • H4f16
  • H4ft
  • Hat1
  • Hbo1
  • Hcfc1
  • Hist1h2ba
  • Hist1h2bc
  • Hist1h2bg
  • Hist1h2bo
  • Hist1h2bq
  • Hist1h4b
  • Hist1h4m
  • Hist2h3c2
  • Hist4
  • Hist4h4
  • Ing4
  • Ing5
  • Jade1
  • Jade2
  • Jade3
  • Kansl1
  • Kansl2
  • Kansl3
  • Kat6a
  • Kat6b
  • Kat7
  • Kat8
  • LOC100365043
  • LOC100910200
  • LOC100912338
  • LOC684797
  • Mcrs1
  • Meaf6
  • Moz
  • Msl1
  • Msl2
  • Msl3
  • Myst1
  • Myst2
  • Myst3
  • Ncoa1
  • Ncoa2
  • Nsl2
  • Nsl3
  • Ogt
  • Pax3
  • Phf15
  • Phf20
  • Rbbp7
  • Th2b
  • Tif2
  • Wdr5
Rattus norvegicus (Norway rat)
HCN channels
  • Hcn1
  • Hcn2
  • Hcn3
  • Hcn4
Rattus norvegicus (Norway rat)
HDL assembly
  • A2m
  • A2m1
  • Abca1
  • Apoa1
  • Bmp1
  • LOC100364821
  • Pkacb
  • Prkaca
  • Prkacb
  • Zdhhc8
Rattus norvegicus (Norway rat)
HDL clearance
  • Amn
  • Apoa1
  • Cubn
  • Hbp
  • Hdlbp
  • Ifcr
  • Scarb1
Rattus norvegicus (Norway rat)
HDL remodeling
  • Abcg1
  • Alb
  • Apoa1
  • Apoc2
  • Apoc3
  • Apoe
  • Lcat
  • Lipg
  • Pltp
Rattus norvegicus (Norway rat)
HDMs demethylate histones
  • Arid5b
  • H3c13
  • H4c16
  • H4c2
  • H4f16
  • H4ft
  • Hist1h4b
  • Hist1h4m
  • Hist2h3c2
  • Hist4
  • Hist4h4
  • Jhdm2a
  • Jhdm3d
  • Jmjd1a
  • Jmjd2d
  • Jmjd6
  • Kdm1a
  • Kdm1b
  • Kdm2a
  • Kdm2b
  • Kdm3a
  • Kdm3b
  • Kdm4a
  • Kdm4b
  • Kdm4c
  • Kdm4d
  • Kdm5a
  • Kdm5b
  • Kdm5c
  • Kdm5d
  • Kdm6a
  • Kdm6b
  • Kdm7a
  • Mina
  • Mina53
  • Phf2
  • Phf8
  • Ptdsr
  • Riox2
  • Tsga
  • Uty
Rattus norvegicus (Norway rat)
HS-GAG biosynthesis
  • 3ost
  • 3ost1
  • 3ost2
  • Agrin
  • Agrn
  • Ext1
  • Ext2
  • Gpc1
  • Gpc2
  • Gpc3
  • Gpc4
  • Gpc5
  • Gpc6
  • Hs2st1
  • Hs3st1
  • Hs3st2
  • Hs3st3a1
  • Hs3st3b1
  • Hs3st4
  • Hs3st5
  • Hs3st6
  • Hs6st1
  • Hs6st2
  • Hs6st3
  • Hspg1
  • Hsst
  • Hsst1
  • Ndst1
  • Ndst2
  • Ndst3
  • Ndst4
  • Sdc1
  • Sdc2
  • Sdc3
  • Sdc4
  • Slc35d2
  • Synd1
  • Synd2
  • Synd3
  • Synd4
Rattus norvegicus (Norway rat)
HS-GAG degradation
  • Agrin
  • Agrn
  • Glb1
  • Glb1l
  • Glb1l2
  • Glb1l3
  • Gpc1
  • Gpc2
  • Gpc3
  • Gpc4
  • Gpc5
  • Gpc6
  • Gus
  • Gusb
  • Hep
  • Hpse
  • Hpse2
  • Hspg1
  • Ids
  • Idua
  • LOC100363795
  • Naglu
  • Sdc1
  • Sdc2
  • Sdc3
  • Sdc4
  • Sgsh
  • Synd1
  • Synd2
  • Synd3
  • Synd4
Rattus norvegicus (Norway rat)
HSF1 activation
  • Eef1a
  • Eef1a1
  • Hsf1
  • Hsp84
  • Hsp86
  • Hsp90aa1
  • Hsp90ab1
  • Hspc3
  • Hspca
  • Hspcb
  • Ptges3
  • Tebp
  • Vcp
  • Ywhae
Rattus norvegicus (Norway rat)
HSF1-dependent transactivation
  • Akt1s1
  • Camk2a
  • Camk2b
  • Camk2d
  • Camk2g
  • Cryab
  • Cryac
  • Dnajb1
  • Frap1
  • Gbl
  • Hsbp1
  • Hsc70
  • Hsc73
  • Hsf1
  • Hsp22
  • Hsp70-1
  • Hsp70-2
  • Hsp70-3
  • Hsp84
  • Hsp86
  • Hsp90aa1
  • Hsp90ab1
  • Hspa1
  • Hspa1a
  • Hspa1b
  • Hspa1l
  • Hspa2
  • Hspa8
  • Hspb8
  • Hspc3
  • Hspca
  • Hspcb
  • Lst8
  • Mlst8
  • Mtor
  • Raft1
  • Rptor
Rattus norvegicus (Norway rat)

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GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01


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Last updated: August 19, 2024