GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 26 - 50 of 1070 in total
Pathway Name Protein Name UniProt ID Gene Symbol Organism GlyTouCan ID ▼
Lewis blood group biosynthesis
  • B3galt1
  • B3galt2
  • B3galt4
  • B3galt5
  • B4galnt2
  • Ftb
  • Fut10
  • Fut11
  • Fut2
  • Fut4
  • Fut7
  • Fut9
  • Rfuc-t
  • Sec1
  • Siat10
  • Siat4c
  • Siat6
  • St3gal3
  • St3gal4
  • St3gal6
  • St6galnac6
Rattus norvegicus (Norway rat)
Hyaluronan uptake and degradation
  • Cd44
  • Chp
  • Chp1
  • Gus
  • Gusb
  • Hexa
  • Hexb
  • Hyal1
  • Hyal2
  • Hyal3
  • Nhe1
  • Slc9a1
Rattus norvegicus (Norway rat)
Hyaluronan biosynthesis and export
  • Abcc5
  • Cemip
  • HAS1
  • HAS3
  • Has1
  • Has2
  • Has3
  • LOC282821
  • Mrp5
  • RGD1305254
Rattus norvegicus (Norway rat)
Pentose phosphate pathway
  • Dera
  • G6pd
  • G6pdx
  • Pgd
  • Pgls
  • Pgm2
  • RBKS
  • Rbks
  • Rpe
  • Rpia
  • Taldo1
  • Tkt
Rattus norvegicus (Norway rat)
CS/DS degradation
  • Arsb
  • Bcan
  • Behab
  • Bgn
  • Caleb
  • Cspg2
  • Cspg3
  • Cspg4
  • Cspg5
  • Dcn
  • Hexa
  • Hexb
  • Hyal1
  • Hyal3
  • Ids
  • Idua
  • LOC100363795
  • Ncan
  • Ng2
  • Ngc
  • Vcan
Rattus norvegicus (Norway rat)
Glycosphingolipid catabolism
  • AABR07013255.1
  • Arsa
  • Arsb
  • Arse
  • Arsg
  • Arsi
  • Arsj
  • Arsk
  • Arsl
  • Asah1
  • Asah2
  • Cca1
  • Ctsa
  • Enpp7
  • Galc
  • Gba
  • Gba1
  • Gba2
  • Gba3
  • Gla
  • Glb1
  • Glb1l
  • Glb1l2
  • Glb1l3
  • Gm2a
  • Hexa
  • Hexb
  • M6pr
  • Neu1
  • Neu2
  • Neu3
  • Neu4
  • Psap
  • Sgp1
  • Smpd1
  • Smpd2
  • Smpd3
  • Smpd4
  • Sts
  • Sumf1
  • Sumf2
Rattus norvegicus (Norway rat)
Keratan sulfate degradation
  • Acan
  • Agc
  • Agc1
  • Fmod
  • Glb1
  • Glb1l
  • Glb1l2
  • Glb1l3
  • Gns
  • Hexa
  • Hexb
  • Kera
  • Lcn
  • Ldc
  • Lum
  • Omd
  • Prelp
Rattus norvegicus (Norway rat)
N-glycan trimming in the ER and Calnexin/Calreticulin cycle
  • Amfr
  • Derl1
  • Engase
  • LOC100360645
  • Ngly1
  • Psmc1
  • Rad23b
  • Rps27a
  • Saks1
  • Uba80
  • Ubb
  • Ubbl1
  • Ubc
  • Ubcep1
  • Ubcl1
  • Ubxn1
  • Vcp
Rattus norvegicus (Norway rat)
HS-GAG degradation
  • Agrin
  • Agrn
  • Glb1
  • Glb1l
  • Glb1l2
  • Glb1l3
  • Gpc1
  • Gpc2
  • Gpc3
  • Gpc4
  • Gpc5
  • Gpc6
  • Gus
  • Gusb
  • Hep
  • Hpse
  • Hpse2
  • Hspg1
  • Ids
  • Idua
  • LOC100363795
  • Naglu
  • Sdc1
  • Sdc2
  • Sdc3
  • Sdc4
  • Sgsh
  • Synd1
  • Synd2
  • Synd3
  • Synd4
Rattus norvegicus (Norway rat)
Lysosomal oligosaccharide catabolism
  • Man2b1
  • Man2b2
  • Man2c1
  • Manba
  • Mrfap1
Rattus norvegicus (Norway rat)
Acyl chain remodeling of DAG and TAG
  • Atgl
  • Awat2
  • Dgat
  • Dgat1
  • Dgat2
  • Dgat2l6
  • Mgl2
  • Mgll
  • Pnpla2
  • Pnpla3
Rattus norvegicus (Norway rat)
Opsins
  • Bcp
  • Gcp
  • Opn1mw
  • Opn1sw
  • Opn3
  • Opn4
  • Opn5
  • Rgr
  • Rho
  • Rrh
Rattus norvegicus (Norway rat)
Golgi Associated Vesicle Biogenesis
  • AABR07054189.1
  • Acbd3
  • Adtb1
  • Ap1b1
  • Ap1g1
  • Ap1m1
  • Ap1m2
  • Ap1s1
  • Ap1s2
  • Ap1s3
  • Ap3b1
  • Ap3s1
  • Ap4b1
  • Ap4e1
  • Arf1
  • Arrb1
  • Bloc1s1
  • Bloc1s3
  • Bloc1s4
  • Bloc1s6
  • Bloc1s7
  • Bloc1s8
  • Calm
  • Clint1
  • Clta
  • Cltc
  • Cpd
  • Dnajc6
  • Dnm2
  • Dtnbp1
  • Dyn2
  • Fth
  • Fth1
  • Fth1-ps5
  • Ftl
  • Ftl1
  • Ftl1l2
  • Gak
  • Gcp60
  • Golgb1
  • Hip1r
  • Hsc70
  • Hsc73
  • Hspa8
  • Igf2r
  • LOC100359668
  • Napa
  • Necap1
  • Ocrl
  • Picalm
  • Pik3c2a
  • Pldn
  • Pum1
  • Rab5c
  • Sh3d19
  • Sh3d2a
  • Sh3gl2
  • Sh3p4
  • Snap
  • Snap25bp
  • Snapa
  • Snapap
  • Snapin
  • Snx2
  • Snx5
  • Snx9
  • Sort1
  • Syb2
  • Sybl1
  • Tbc1d8b
  • Tfrc
  • Tpd52
  • Tpd52l1
  • Trfr
  • Ttgn1
  • Txndc5
  • Vamp2
  • Vamp7
  • Vamp8
  • Yipf6
Rattus norvegicus (Norway rat)
RAF/MAP kinase cascade
  • Actn2
  • Angpt1
  • Areg
  • Artn
  • Ash
  • Btc
  • CaMIII
  • Calm3
  • Cam3
  • Camc
  • Camk2a
  • Camk2b
  • Camk2d
  • Camk2g
  • Csf2
  • Csf2rb
  • Csfgm
  • Dlg1
  • Dlg2
  • Dlg3
  • Dlg4
  • Dlgh1
  • Dlgh2
  • Dlgh3
  • Dlgh4
  • Dtr
  • Egf
  • Egfr
  • Erbb2
  • Erbb3
  • Ereg
  • Erk1
  • Erk2
  • FGF15
  • FGF22
  • FGF6
  • Fak
  • Fak1
  • Fgf-1
  • Fgf-2
  • Fgf-5
  • Fgf-7
  • Fgf-9
  • Fgf1
  • Fgf10
  • Fgf16
  • Fgf17
  • Fgf18
  • Fgf19
  • Fgf2
  • Fgf20
  • Fgf22
  • Fgf23
  • Fgf3
  • Fgf4
  • Fgf5
  • Fgf5c
  • Fgf5d
  • Fgf6
  • Fgf7
  • Fgf7a
  • Fgf7b
  • Fgf8
  • Fgf8a
  • Fgf9
  • Fgfa
  • Fgfr1
  • Fgfr2
  • Fgfr3
  • Fgfr4
  • Flg
  • Flt3
  • Frs2
  • Frs3
  • Fyn
  • Gdnf
  • Gdnfra
  • Gfra1
  • Gfra2
  • Gfra3
  • Gfra4
  • GluN2D
  • Grb2
  • Grf2
  • Grin1
  • Grin2b
  • Grin2d
  • Hbegf
  • Hegfl
  • Hgf
  • Hras
  • Hras1
  • Il-2
  • Il-3
  • Il-5
  • Il2
  • Il2ra
  • Il2rb
  • Il3
  • Il3ra
  • Il5
  • Irs-1
  • Irs1
  • Irs2
  • Jak1
  • Jak2
  • Jak3
  • KIT
  • Kgf
  • Kit
  • Kitl
  • Kitlg
  • Kl
  • Klb
  • Kras
  • Kras2
  • Lap1
  • Lat
  • Lrp
  • Lrrc7
  • Mapk
  • Mapk1
  • Mapk3
  • Met
  • Mgf
  • Ncam
  • Ncam1
  • Ndf
  • Nefl
  • Neu
  • Nf68
  • Nfl
  • Nmdar1
  • Nras
  • Nrg1
  • Nrg2
  • Nrg3
  • Nrtn
  • Nshc
  • Ntak
  • Pdgfa
  • Pdgfb
  • Pdgfr
  • Pdgfr1
  • Pdgfra
  • Pdgfrb
  • Pdzgef1
  • Pea15
  • Pik3ca
  • Pik3cb
  • Pik3r1
  • Pik3r2
  • Prkm1
  • Prkm3
  • Psd95
  • Pspn
  • Ptk2
  • Ptpra
  • Ralgds
  • Ralgdsl1
  • Ralgdsl2
  • Ranbp9
  • Rapgef2
  • Rasgef1a
  • Rasgrf1
  • Rasgrf2
  • Rasgrp
  • Rasgrp1
  • Rasgrp3
  • Rasgrp4
  • Ret
  • Retl1
  • Rgl1
  • Rgl2
  • Rpa1
  • Sck
  • Sdgf
  • Shc1
  • Shc2
  • Shc3
  • Shcc
  • Snt2
  • Sos1
  • Spna2
  • Spnb3
  • Spta1
  • Spta2
  • Sptan1
  • Sptb
  • Sptbn1
  • Sptbn2
  • Sptbn4
  • Sptbn5
  • Tek
  • Tgfa
  • Trnr1
Rattus norvegicus (Norway rat)
SHC-mediated cascade:FGFR1
  • Ash
  • FGF22
  • FGF6
  • Fgf-1
  • Fgf-2
  • Fgf-5
  • Fgf-9
  • Fgf1
  • Fgf10
  • Fgf17
  • Fgf2
  • Fgf20
  • Fgf22
  • Fgf23
  • Fgf3
  • Fgf4
  • Fgf5
  • Fgf5c
  • Fgf5d
  • Fgf6
  • Fgf7a
  • Fgf7b
  • Fgf8
  • Fgf9
  • Fgfa
  • Fgfr1
  • Flg
  • Grb2
  • Hras
  • Hras1
  • Kl
  • Kras
  • Kras2
  • Nras
  • Shc1
  • Sos1
Rattus norvegicus (Norway rat)
Regulation of TP53 Activity through Acetylation
  • Akt1
  • Akt2
  • Akt3
  • Brd1
  • Brd7
  • Brpf1
  • Brpf3
  • Chd3
  • Chd4
  • Ep300
  • Gatad2a
  • Gatad2b
  • Hdac1
  • Hdac2
  • Ing5
  • Kat6a
  • Mbd3
  • Meaf6
  • Moz
  • Mta2
  • Myst3
  • P53
  • Pml
  • Rbbp4
  • Rbbp7
  • Tp53
Rattus norvegicus (Norway rat)
Intracellular oxygen transport
  • Cygb
  • Mb
  • Ngb
  • Stap
Rattus norvegicus (Norway rat)
Unblocking of NMDA receptors, glutamate binding and activation
  • Actn2
  • CaMIII
  • Calm3
  • Cam3
  • Camc
  • Camk2a
  • Camk2b
  • Camk2d
  • Camk2g
  • Dlg1
  • Dlg2
  • Dlg3
  • Dlg4
  • Dlgh1
  • Dlgh2
  • Dlgh3
  • Dlgh4
  • GluA1
  • GluA2
  • GluA3
  • GluN2D
  • Glur1
  • Glur2
  • Glur3
  • Glur4
  • Gria1
  • Gria2
  • Gria3
  • Gria4
  • Grin1
  • Grin2a
  • Grin2b
  • Grin2c
  • Grin2d
  • Lap1
  • Lrrc7
  • Nefl
  • Nf68
  • Nfl
  • Nmdar1
  • Psd95
Rattus norvegicus (Norway rat)
Methylation
  • Ahcy
  • Ams1
  • Ams2
  • As3mt
  • Comt
  • Cyp1a-2
  • Cyp1a2
  • Cyt19
  • Gsto1
  • Mat1a
  • Mat2a
  • Mat2b
  • Mtr
  • Mtrr
  • Nnmt
  • Tpmt
Rattus norvegicus (Norway rat)
Regulation of cytoskeletal remodeling and cell spreading by IPP complex components
  • Actn1
  • Actp
  • Arhgef6
  • Lims1
  • Parva
  • Parvb
  • Pxn
  • Rsu1
  • Tesk1
Rattus norvegicus (Norway rat)
TRAF6 mediated induction of NFkB and MAP kinases upon TLR7/8 or 9 activation
  • Ecsit
  • Map3k1
  • Mekk
  • Mekk1
  • Traf6
Rattus norvegicus (Norway rat)
FOXO-mediated transcription of cell cycle genes
  • Fkhl1
  • Foxg1
  • Foxg1b
  • Foxo1
  • Foxo1a
  • Foxo3
  • Foxo4
  • Madh2
  • Madh3
  • Madh4
  • Smad2
  • Smad3
  • Smad4
Rattus norvegicus (Norway rat)
Activation of Matrix Metalloproteinases
  • Cma1
  • Col18a1
  • Ctrb
  • Ctrb1
  • Ctsg
  • Ctsk
  • Ctsl
  • Ctsl1
  • ENSRNOG00000066972
  • ENSRNOG00000067174
  • ENSRNOG00000069479
  • ENSRNOG00000071144
  • Elane
  • Fur
  • Furin
  • Klk-1
  • Klk-10
  • Klk-12
  • Klk-2
  • Klk-7
  • Klk-8
  • Klk-9
  • Klk1
  • Klk10
  • Klk12
  • Klk1c4
  • Klk1c6
  • Klk2
  • Klk3
  • Klk6
  • Klk7
  • Klk8
  • Klk9
  • Klkb1
  • Klks3
  • LOC100365995
  • LOC102554637
  • LOC683849
  • Mcp6
  • Mcpt3
  • Mcpt6
  • Mmp-7
  • Mmp1
  • Mmp10
  • Mmp11
  • Mmp13
  • Mmp14
  • Mmp15
  • Mmp16
  • Mmp17
  • Mmp1a
  • Mmp2
  • Mmp24
  • Mmp25
  • Mmp3
  • Mmp7
  • Mmp8
  • Mmp9
  • Mt5mmp
  • Mtmmp
  • Ngfg
  • Pcsk3
  • Pk
  • Plg
  • Prss1
  • Prss2
  • Prss2l1
  • Prss3
  • Spock3
  • Timp-1
  • Timp-2
  • Timp1
  • Timp2
  • Ton
  • Tpsb2
  • Trp1
  • Try1
  • Try10
  • Try2
  • Try4
  • Try5
  • Tryp1
Rattus norvegicus (Norway rat)
Trafficking of AMPA receptors
  • Akap150
  • Akap5
  • Cacng2
  • Cacng3
  • Cacng4
  • Cacng8
  • Camk2a
  • Camk2b
  • Camk2d
  • Camk2g
  • Dlg1
  • Dlg4
  • Dlgh1
  • Dlgh4
  • Epb4.1l1
  • Epb41l1
  • GluA1
  • GluA3
  • Glur1
  • Glur3
  • Glur4
  • Gria1
  • Gria3
  • Gria4
  • Mdm2
  • Myo6
  • Psd95
  • Stg
Rattus norvegicus (Norway rat)
betaKlotho-mediated ligand binding
  • FGF15
  • Fgf19
  • Fgf8a
  • Fgfr4
  • Klb
Rattus norvegicus (Norway rat)

About Release Notes Help Feedback

International Collaboration

GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01


Logo License Policies Site Map

Contact: support@glycosmos.org

This work is licensed under Creative Commons Attribution 4.0 International


GlyCosmos Portal v4.0.0

Last updated: August 19, 2024