GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 1026 - 1050 of 1070 in total
Pathway Name Protein Name UniProt ID Gene Symbol Organism ▲ GlyTouCan ID
Thromboxane signalling through TP receptor
  • Aamp
  • Gna11
  • Gna13
  • Gna14
  • Gna15
  • Gnaq
  • Gnb1
  • Gnb2
  • Gnb3
  • Gnb4
  • Gnb5
  • Gng10-ps1
  • Gng11
  • Gng12
  • Gng3
  • Gng4
  • Gng5
  • Gng5-ps4
  • Gng7
  • Gng8
  • Gng9
  • Gngt1
  • Gngt11
  • Gngt5
  • Gngt7
  • Gngt9
  • Tbxa2r
Rattus norvegicus (Norway rat)
Spry regulation of FGF signaling
  • Ash
  • Braf
  • Cbl
  • Erk1
  • Erk2
  • Grb2
  • LOC100360645
  • Mapk
  • Mapk1
  • Mapk3
  • Mknk1
  • Mnk1
  • Ppp2ca
  • Ppp2cb
  • Ppp2r1a
  • Prkm1
  • Prkm3
  • Ptpn11
  • Rps27a
  • Spry2
  • Src
  • Uba80
  • Ubb
  • Ubbl1
  • Ubc
  • Ubcep1
  • Ubcl1
Rattus norvegicus (Norway rat)
SUMOylation of chromatin organization proteins
  • Aaas
  • Cbx2
  • Cbx4
  • Cbx8
  • Gp210
  • H4c16
  • H4c2
  • H4f16
  • H4ft
  • Hdac1
  • Hdac2
  • Hdac4
  • Hist1h4b
  • Hist1h4m
  • Hist4
  • Hist4h4
  • L3mbtl2
  • LOC683983
  • Miz1
  • Mrnp41
  • Ndc1
  • Npap60
  • Nup107
  • Nup121
  • Nup133
  • Nup153
  • Nup155
  • Nup160
  • Nup188
  • Nup205
  • Nup210
  • Nup214
  • Nup35
  • Nup37
  • Nup42
  • Nup43
  • Nup50
  • Nup53
  • Nup54
  • Nup58
  • Nup62
  • Nup84
  • Nup85
  • Nup88
  • Nup93
  • Nup98
  • Nupl1
  • Nupl2
  • Pcnt1
  • Phc1
  • Phc2
  • Phc3
  • Pias1
  • Pias2
  • Piasx
  • Pom121
  • Pom210
  • Rae1
  • Ranbp2
  • Ring1
  • Ring1b
  • Rnf1
  • Rnf2
  • Satb1
  • Satb2
  • Scml2
  • Sec13
  • Sec13l1
  • Smt3a
  • Smt3h2
  • Sumo1
  • Sumo2
  • Sumo3
  • Suz12
  • Tmem48
  • Tpr
  • Ubce9
  • Ube2i
Rattus norvegicus (Norway rat)
Sensory perception of salty taste
  • Renac
  • Scnn1a
  • Scnn1b
  • Scnn1g
Rattus norvegicus (Norway rat)
Lysosphingolipid and LPA receptors
  • Edg1
  • Edg2
  • Edg5
  • Edg7
  • Edg8
  • Gpcr91
  • Lpa1
  • Lpa3
  • Lpar1
  • Lpar2
  • Lpar3
  • Lpar5
  • Lppr1
  • Lppr2
  • Lppr3
  • Lppr4
  • Nrg1
  • Php1
  • Plppr1
  • Plppr2
  • Plppr3
  • Plppr4
  • Plppr5
  • Prg1
  • Prg2
  • Prg3
  • Prg4
  • S1pr1
  • S1pr2
  • S1pr3
  • S1pr4
  • S1pr5
Rattus norvegicus (Norway rat)
Rhesus glycoproteins mediate ammonium transport.
  • Rh50
  • Rhag
  • Rhbg
  • Rhcg
Rattus norvegicus (Norway rat)
SMAD2/SMAD3:SMAD4 heterotrimer regulates transcription
  • AABR07035338.1
  • Ccnc
  • Ccnk
  • Ccnt1
  • Ccnt2
  • Cdk8
  • Cdk9
  • E2f4
  • E2f5
  • Erk1
  • Erk2
  • Fur
  • Furin
  • LOC100360645
  • MGC112830
  • Madh2
  • Madh3
  • Madh4
  • Madh7
  • Mapk
  • Mapk1
  • Mapk3
  • Men1
  • Pcsk3
  • Prkm1
  • Prkm3
  • Rbl1
  • Rnf111
  • Rps27a
  • Smad2
  • Smad3
  • Smad4
  • Smad7
  • Sp1
  • Tfdp1
  • Tfdp2
  • Uba80
  • Ubb
  • Ubbl1
  • Ubc
  • Ubcep1
  • Ubcl1
  • Wwtr1
Rattus norvegicus (Norway rat)
Generation of second messenger molecules
  • AABR07044416.1
  • Arrb2-ps
  • Cd101
  • Cd247
  • Cd3d
  • Cd3e
  • Cd3g
  • Cd4
  • DA1
  • Db2
  • ENSRNOG00000065769
  • ENSRNOG00000065908
  • ENSRNOG00000065955
  • ENSRNOG00000070909
  • Fyb
  • Fyb1
  • Grap2
  • H2-Ea
  • Hla-dma
  • Hla-dmb
  • Itk
  • LOC100911800
  • Lat
  • Lck
  • Lcp2
  • Nck1
  • Pak1
  • Pak2
  • Pak3
  • Plcg1
  • Plcg2
  • Psmb9
  • RT1-Ba
  • RT1-Bb
  • RT1-DOb
  • RT1-Da
  • RT1-Db1
  • RT1-Db2
  • RT1-Ha
  • RT1-Hb-ps1
  • T3d
  • Tap1
  • Tap2
  • Tesb
  • Trbv16
  • Zap70
Rattus norvegicus (Norway rat)
Trafficking and processing of endosomal TLR
  • Cnpy3
  • Cts7l2
  • Ctsb
  • Ctsk
  • Ctsl
  • Ctsl1
  • Ctsll3
  • Ctss
  • Grp94
  • Hsp90b1
  • Hspc4
  • Lgmn
  • Prsc1
  • RGD1308751
  • Tlr7
  • Tlr8
  • Tlr9
  • Tra1
  • Unc93b1
Rattus norvegicus (Norway rat)
Drug-mediated inhibition of ERBB2 signaling
  • Cdc37
  • Erbb2
  • Hsp86
  • Hsp90aa1
  • Hspca
  • Neu
Rattus norvegicus (Norway rat)
RND1 GTPase cycle
  • Aldh3a2
  • Aldh4
  • Ankrd26
  • Arhgap35
  • Arhgap5
  • Arms
  • Cav
  • Cav1
  • Ccdc88a
  • Cpd
  • Depdc1b
  • Dlg5
  • Dsp
  • Dst
  • Epha2
  • Epsti1
  • Fam135a
  • Fam83b
  • Flot2
  • Frs2
  • Frs3
  • Grb7
  • Grlf1
  • Hop
  • Kidins220
  • Kif14
  • Muc13
  • P190A
  • Pik3r1
  • Pik3r2
  • Pkp4
  • Plekhg5
  • Plxna1
  • Ptpn13
  • RGD1310313
  • Rasal2
  • Rbm39
  • Rbmx
  • Rbmxrt
  • Reg1
  • Rnd1
  • Rras2
  • Scg10
  • Scgn10
  • Snt2
  • Soc
  • Stip1
  • Stmn2
  • Tech
  • Tfrc
  • Tmem59
  • Trfr
  • Trp
  • Txnl1
  • Ubxd5
  • Ubxn11
  • Vangl1
  • Vangl2
  • Wdr6
  • p190ARHOGAP
Rattus norvegicus (Norway rat)
Aggrephagy
  • Abcc7
  • Arl13b
  • Cap1
  • Cetn1
  • Cftr
  • Dhc1
  • Dlc2
  • Dnch1
  • Dnchc1
  • Dnci1
  • Dnci2
  • Dncic1
  • Dncic2
  • Dncl1
  • Dnclc1
  • Dncli1
  • Dncli2
  • Dnec1
  • Dyhc
  • Dync1h1
  • Dync1i1
  • Dync1i2
  • Dync1li1
  • Dync1li2
  • Dynll1
  • Dynll2
  • ENSRNOG00000067007
  • Ift88
  • LOC100360645
  • LOC309692
  • Map1c
  • Park2
  • Park7
  • Pcnt
  • Pin
  • Prkn
  • Rps27a
  • Uba80
  • Ubb
  • Ubbl1
  • Ubc
  • Ubcep1
  • Ubcl1
Rattus norvegicus (Norway rat)
EPHB-mediated forward signaling
  • Actb
  • Actg
  • Actg1
  • Actr2
  • Actr3
  • Arha
  • Arha2
  • Arhgef28
  • Arp2
  • Arp3
  • Arpc1a
  • Arpc1b
  • Arpc2
  • Arpc3
  • Arpc4
  • Arpc5
  • Cdc42
  • Duo
  • Ehsh1
  • Fak
  • Fak1
  • Fyn
  • Grin1
  • Grin2b
  • Hapip
  • Hras
  • Hras1
  • Hspg1
  • Itsn
  • Itsn1
  • Kalrn
  • Lyn
  • Nmdar1
  • Pak1
  • Ptk2
  • Rac
  • Rac1
  • Rasa
  • Rasa1
  • Rgnef
  • Rhoa
  • Rock1
  • Rock2
  • Sdc2
  • Src
  • Synd2
  • Tiam1
  • Yes1
Rattus norvegicus (Norway rat)
Lectin pathway of complement activation
  • Colec10
  • Crarf
  • Fcn1
  • Fcn2
  • Fcna
  • Fcnb
  • Masp1
  • Masp2
  • Masp3
  • Mbl2
Rattus norvegicus (Norway rat)
TGF-beta receptor signaling activates SMADs
  • Cbl
  • Fkbp1
  • Fkbp1a
  • Fur
  • Furin
  • Itga8
  • Itgav
  • Itgb1
  • Itgb3
  • Itgb5
  • Itgb6
  • Itgb8
  • Ltbp1
  • Ltbp2
  • Ltbp3
  • Ltbp4
  • Madh2
  • Madh3
  • Madh4
  • Nedd8
  • Pcsk3
  • Smad2
  • Smad3
  • Smad4
  • Tgf-b3
  • Tgfb1
  • Tgfb2
  • Tgfb3
  • Tgfbr1
  • Tgfbr2
  • Tgfbr3
  • Ube2m
  • Zfyve9
Rattus norvegicus (Norway rat)
E3 ubiquitin ligases ubiquitinate target proteins
  • Bcl10
  • Bre1b
  • Cdc73
  • Ctr9
  • ENSRNOG00000064540
  • ENSRNOG00000066901
  • ENSRNOG00000068034
  • H2bc1
  • H2bc12l1
  • H2bc6
  • H2bcl1
  • H2bcl2
  • Hist1h2ba
  • Hist1h2bc
  • Hist1h2bg
  • Hist1h2bo
  • Hist1h2bq
  • Hrpt2
  • LOC100360645
  • LOC100365043
  • LOC100366017
  • LOC100910200
  • LOC684797
  • Leo1
  • NEWGENE_1308361
  • Paf1
  • Paf3
  • Pex10
  • Pex12
  • Pex14
  • Pex2
  • Pex5
  • Pex5_predicted
  • Pmp35
  • Prkdc
  • Pxmp3
  • RGD1562407
  • Rad6b
  • Rnf144a
  • Rnf181
  • Rnf20
  • Rnf40
  • Rps27a
  • Skic8
  • Th2b
  • Uba80
  • Ubb
  • Ubbl1
  • Ubc
  • Ubc4
  • Ubcep1
  • Ubch4
  • Ubch5b
  • Ubcl1
  • Ube2a
  • Ube2b
  • Ube2d1
  • Ube2d2
  • Ube2d3
  • Ube2e1
  • Ube2l3
  • WAC
  • Wac
  • Wdr61
Rattus norvegicus (Norway rat)
Tryptophan catabolism
  • Aadat
  • Ccbl1
  • Haao
  • Ido
  • Ido1
  • Ido2
  • Indo
  • Indol1
  • Kat
  • Kat2
  • Kmo
  • Kyat1
  • Kynu
  • Lat1
  • Mpe16
  • Slc36a4
  • Slc3a2
  • Slc7a5
  • Ta1
  • Tdo
  • Tdo2
Rattus norvegicus (Norway rat)
Metabolism of Angiotensinogen to Angiotensins
  • Ace
  • Ace2
  • Agt
  • Atp6ap2
  • Atp6ip2
  • Ces1d
  • Ces3
  • Cma1
  • Cpa3
  • Cpb
  • Cpb1
  • Cpb2
  • Ctsd
  • Ctsg
  • Ctsy
  • Ctsz
  • Dcp1
  • Enpep
  • Mcpt3
  • Mme
  • Ren
  • Ren1
  • Serpina8
Rattus norvegicus (Norway rat)
RHO GTPases activate PAKs
  • CaMIII
  • Calm3
  • Cam3
  • Camc
  • Cdc42
  • Flna
  • LOC685883
  • Limk
  • Limk1
  • Mbs
  • Mrlc2
  • Mrlcb
  • Myh10
  • Myh14
  • Myh9
  • Myl12b
  • Myl6
  • Myl9
  • Mylc2b
  • Mylk
  • Mypt1
  • Myrl2
  • Nf2
  • Pak1
  • Pak2
  • Pak3
  • Ppp1cb
  • Ppp1r12a
  • Ppp1r12b
  • Rac
  • Rac1
Rattus norvegicus (Norway rat)
TP53 Regulates Transcription of Death Receptors and Ligands
  • Igfbp-3
  • Igfbp3
  • Tmem219
Rattus norvegicus (Norway rat)
Non-integrin membrane-ECM interactions
  • Ddr1
  • Ddr2
  • Eddr1
  • Ptk3
Rattus norvegicus (Norway rat)
Electric Transmission Across Gap Junctions
  • Gja10
  • Gja7
  • Gja9
  • Gjc1
  • Gjd2
  • Panx1
  • Panx2
  • Px1
  • Px2
Rattus norvegicus (Norway rat)
Signaling by Erythropoietin
  • Epor
  • Irs2
  • Jak2
  • Lyn
Rattus norvegicus (Norway rat)
KSRP (KHSRP) binds and destabilizes mRNA
  • Akt1
  • Dcp2
  • Dis3
  • Exosc1
  • Exosc2
  • Exosc3
  • Exosc4
  • Exosc5
  • Exosc6
  • Exosc7
  • Exosc8
  • Exosc9
  • Fubp2
  • Khsrp
  • LOC103690064
  • LOC679140
  • Msfs1
  • Parn
  • Ywhaz
Rattus norvegicus (Norway rat)
Regulation of ornithine decarboxylase (ODC)
  • Azin1
  • LOC100360846
  • LOC100365869
  • Lmp10
  • Lmp2
  • Mecl1
  • Mss1
  • Nmor1
  • Nqo1
  • Oaz
  • Oaz1
  • Oaz2
  • Oaz3
  • Oazi
  • Oazin
  • Odc
  • Odc1
  • Psma1
  • Psma2
  • Psma3
  • Psma4
  • Psma5
  • Psma6
  • Psma7
  • Psma8
  • Psmb1
  • Psmb10
  • Psmb2
  • Psmb3
  • Psmb4
  • Psmb5
  • Psmb6
  • Psmb6l
  • Psmb6l1
  • Psmb7
  • Psmb8
  • Psmb9
  • Psmc1
  • Psmc2
  • Psmc3
  • Psmc4
  • Psmc5
  • Psmc6
  • Psmd1
  • Psmd10
  • Psmd11
  • Psmd12
  • Psmd13
  • Psmd14
  • Psmd2
  • Psmd3
  • Psmd5
  • Psmd6
  • Psmd7
  • Psmd8
  • Psmd9
  • Psme1
  • Psme2
  • Psme4
  • Psmf1
  • Ring12
  • Sug1
  • Tbp1
  • Tbp7
Rattus norvegicus (Norway rat)

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Supported by JST NBDC Grant Number JPMJND2204

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Last updated: August 19, 2024