GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 776 - 800 of 1070 in total
Pathway Name Protein Name ▲ UniProt ID Gene Symbol Organism GlyTouCan ID
Synthesis, secretion, and inactivation of Glucagon-like Peptide-1 (GLP-1)
  • Cd26
  • Dpp4
  • Ffar1
  • Ffar4
  • Gcg
  • Gpr119
  • Gpr120
  • Gpr40
  • Grp
  • Lep
  • O3far1
  • Ob
Rattus norvegicus (Norway rat)
Synthesis, secretion, and inactivation of Glucose-dependent Insulinotropic Polypeptide (GIP)
  • Cd26
  • Dpp4
  • Ffar1
  • Gip
  • Gpr119
  • Gpr40
Rattus norvegicus (Norway rat)
Synthesis of diphthamide-EEF2
  • Atpbd4
  • Dph5
  • Dph6
  • Eef2
Rattus norvegicus (Norway rat)
Reelin signalling pathway
  • Dab1
  • Fyn
  • Reln
  • Ruk
  • Seta
  • Sh3kbp1
  • Vldlr
Rattus norvegicus (Norway rat)
PCP/CE pathway
  • Arha
  • Arha2
  • Daam1
  • Dvl1
  • Dvl2
  • Dvl3
  • Fzd1
  • Fzd3
  • Fzd6
  • Fzd7
  • LOC100361515
  • Pfn1
  • Rac
  • Rac1
  • Rac2
  • Rhoa
  • Wnt-4
  • Wnt-5a
  • Wnt1
  • Wnt11
  • Wnt4
  • Wnt5a
  • Wnt5b
Rattus norvegicus (Norway rat)
Regulated proteolysis of p75NTR
  • Adam17
  • Aph1a
  • Ncstn
  • Ngfr
  • Ps2
  • Psen1
  • Psen2
  • Psenen
  • Psnl1
  • Psnl2
  • Tace
  • Tnfrsf16
Rattus norvegicus (Norway rat)
Synaptic adhesion-like molecules
  • Dlg1
  • Dlg3
  • Dlg4
  • Dlgh1
  • Dlgh3
  • Dlgh4
  • Flot1
  • Flot2
  • GluA1
  • GluA3
  • GluN2D
  • Glur1
  • Glur3
  • Glur4
  • Gria1
  • Gria3
  • Gria4
  • Grin1
  • Grin2a
  • Grin2b
  • Grin2c
  • Grin2d
  • Lar
  • Lrfn1
  • Lrfn2
  • Lrfn3
  • Lrfn4
  • Nmdar1
  • Psd95
  • Ptprd
  • Ptprf
  • Ptprs
  • Reg1
  • Reg2
  • Rtn3
  • Salm1
  • Salm2
  • Salm3
  • Salm4
Rattus norvegicus (Norway rat)
Release of Hh-Np from the secreting cell
  • Dhh
  • Disp2
  • Gpc5
  • Ihh
  • Notum
  • Scube2
  • Shh
  • Vhh-1
Rattus norvegicus (Norway rat)
Attenuation phase
  • Cbp
  • Crebbp
  • Dnajb1
  • Ep300
  • Fkbp4
  • Fkbp52
  • Hsbp1
  • Hsc70
  • Hsc73
  • Hsf1
  • Hsp70-1
  • Hsp70-2
  • Hsp70-3
  • Hsp84
  • Hsp86
  • Hsp90aa1
  • Hsp90ab1
  • Hspa1
  • Hspa1a
  • Hspa1b
  • Hspa1l
  • Hspa2
  • Hspa8
  • Hspc3
  • Hspca
  • Hspcb
  • Hst70
  • Ptges3
  • Tebp
Rattus norvegicus (Norway rat)
Synthesis of glycosylphosphatidylinositol (GPI)
  • Dpm2
  • Piga
  • Pigb
  • Pigc
  • Pigf
  • Pigg
  • Pigh
  • Pigl
  • Pigm
  • Pign
  • Pigp
  • Pigq
  • Pigv
  • Pigw
  • Pigx
Rattus norvegicus (Norway rat)
O-linked glycosylation
  • Ago61
  • B3galnt2
  • Dag1
  • Gtdc2
  • Gyltl1b
  • Large1
  • Large2
  • Pomgnt1
  • Pomgnt2
  • Pomk
  • Pomt1
  • Pomt2
  • Sgk196
Rattus norvegicus (Norway rat)
cGMP effects
  • AABR07006724.1
  • Insp3r
  • Irag1
  • Itpr1
  • Mrvi1
  • Pde10a
  • Pde11a
  • Pde1a
  • Pde1b
  • Pde1b1
  • Pde2a
  • Pde5
  • Pde5a
  • Pde9a
  • Prkg1
  • Prkg2
Rattus norvegicus (Norway rat)
Thyroxine biosynthesis
  • Cga
  • Cga1
  • Dehal1
  • Duox1
  • Duox2
  • Iyd
  • Lnox2
  • Nis
  • Slc5a5
  • Thox2
  • Tpo
  • Tshb
Rattus norvegicus (Norway rat)
Negative feedback regulation of MAPK pathway
  • Braf
  • Erk1
  • Erk2
  • Map2k1
  • Map2k2
  • Mapk
  • Mapk1
  • Mapk3
  • Mek1
  • Mek2
  • Mkk2
  • Prkm1
  • Prkm3
  • Prkmk1
  • Prkmk2
  • Raf
  • Raf1
Rattus norvegicus (Norway rat)
MAPK1 (ERK2) activation
  • Erk2
  • Il-6
  • Il6
  • Il6r
  • Il6ra
  • Il6st
  • Jak1
  • Jak2
  • Map2k2
  • Mapk
  • Mapk1
  • Mek2
  • Mkk2
  • Prkm1
  • Prkmk2
  • Ptpn11
  • Tyk2
Rattus norvegicus (Norway rat)
JNK (c-Jun kinases) phosphorylation and activation mediated by activated human TAK1
  • ENSRNOG00000067007
  • Ikbkg
  • Irak1
  • Irak2
  • Jnk1
  • Jnk2
  • Jnk3
  • Map2k4
  • Map2k7
  • Map3k7
  • Map3k7ip2
  • Mapk10
  • Mapk8
  • Mapk9
  • Nemo
  • Nod1
  • Nod2
  • Prkm10
  • Prkm8
  • Prkm9
  • Ripk2
  • Tab1
  • Tab2
  • Tab3
  • Traf6
Rattus norvegicus (Norway rat)
ERKs are inactivated
  • Bmk1
  • Dusp3
  • Dusp4
  • Dusp6
  • Dusp7
  • Erk1
  • Erk2
  • Erk5
  • Mapk
  • Mapk1
  • Mapk3
  • Mapk7
  • Mkp2
  • Mkp3
  • Mkpx
  • Ppp2ca
  • Ppp2cb
  • Ppp2r1a
  • Ppp2r1b
  • Ppp2r5d
  • Prkm1
  • Prkm3
  • Vrk3
Rattus norvegicus (Norway rat)
SUMOylation of immune response proteins
  • Ikba
  • Ikbke
  • Ikbkg
  • Nemo
  • Nfkb2
  • Nfkbia
  • Pias3
  • Pias4
  • Rela
  • Sumo1
  • Sumo3
  • Topors
  • Ubce9
  • Ube2i
Rattus norvegicus (Norway rat)
Negative regulation of MET activity
  • Ash
  • Cbl
  • Eps15
  • Grb2
  • Hgf
  • Hgs
  • Hrs
  • Hrs2
  • LOC100360645
  • Lrig1
  • Met
  • Ptpn1
  • Ptpn2
  • Ptprj
  • Rps27a
  • Ruk
  • Seta
  • Sh3d2a
  • Sh3d2c1
  • Sh3gl1
  • Sh3gl2
  • Sh3gl3
  • Sh3kbp1
  • Sh3p13
  • Sh3p4
  • Sh3p8
  • Stam
  • Stam2
  • Uba80
  • Ubb
  • Ubbl1
  • Ubc
  • Ubcep1
  • Ubcl1
  • Usp8
Rattus norvegicus (Norway rat)
Negative regulation of FGFR2 signaling
  • Ash
  • Cbl
  • Erk1
  • Erk2
  • FGF22
  • FGF6
  • Fgf-1
  • Fgf-2
  • Fgf-5
  • Fgf-7
  • Fgf-9
  • Fgf1
  • Fgf10
  • Fgf16
  • Fgf17
  • Fgf18
  • Fgf2
  • Fgf20
  • Fgf22
  • Fgf23
  • Fgf3
  • Fgf4
  • Fgf5
  • Fgf5c
  • Fgf5d
  • Fgf6
  • Fgf7
  • Fgf7a
  • Fgf7b
  • Fgf8
  • Fgf9
  • Fgfa
  • Fgfr2
  • Frs2
  • Grb2
  • Kgf
  • LOC100360645
  • Mapk
  • Mapk1
  • Mapk3
  • Prkm1
  • Prkm3
  • Ptpn11
  • Rps27a
  • Uba80
  • Ubb
  • Ubbl1
  • Ubc
  • Ubcep1
  • Ubcl1
Rattus norvegicus (Norway rat)
Negative regulation of FGFR1 signaling
  • Ash
  • Cbl
  • Erk1
  • Erk2
  • FGF22
  • FGF6
  • Fgf-1
  • Fgf-2
  • Fgf-5
  • Fgf-9
  • Fgf1
  • Fgf10
  • Fgf17
  • Fgf2
  • Fgf20
  • Fgf22
  • Fgf23
  • Fgf3
  • Fgf4
  • Fgf5
  • Fgf5c
  • Fgf5d
  • Fgf6
  • Fgf7a
  • Fgf7b
  • Fgf8
  • Fgf9
  • Fgfa
  • Fgfr1
  • Flg
  • Frs2
  • Grb2
  • Kl
  • LOC100360645
  • Mapk
  • Mapk1
  • Mapk3
  • Prkm1
  • Prkm3
  • Ptpn11
  • Rps27a
  • Uba80
  • Ubb
  • Ubbl1
  • Ubc
  • Ubcep1
  • Ubcl1
Rattus norvegicus (Norway rat)
Negative regulation of FGFR3 signaling
  • Ash
  • Cbl
  • Erk1
  • Erk2
  • Fgf-1
  • Fgf-2
  • Fgf-5
  • Fgf-9
  • Fgf1
  • Fgf16
  • Fgf17
  • Fgf18
  • Fgf2
  • Fgf20
  • Fgf23
  • Fgf4
  • Fgf5
  • Fgf7a
  • Fgf8
  • Fgf9
  • Fgfa
  • Fgfr3
  • Frs2
  • Grb2
  • LOC100360645
  • Mapk
  • Mapk1
  • Mapk3
  • Prkm1
  • Prkm3
  • Ptpn11
  • Rps27a
  • Uba80
  • Ubb
  • Ubbl1
  • Ubc
  • Ubcep1
  • Ubcl1
Rattus norvegicus (Norway rat)
Negative regulation of FGFR4 signaling
  • Ash
  • Cbl
  • Erk1
  • Erk2
  • FGF15
  • FGF6
  • Fgf-1
  • Fgf-2
  • Fgf-9
  • Fgf1
  • Fgf16
  • Fgf17
  • Fgf18
  • Fgf19
  • Fgf2
  • Fgf20
  • Fgf23
  • Fgf4
  • Fgf6
  • Fgf7a
  • Fgf7b
  • Fgf8
  • Fgf8a
  • Fgf9
  • Fgfa
  • Fgfr4
  • Frs2
  • Grb2
  • Klb
  • LOC100360645
  • Mapk
  • Mapk1
  • Mapk3
  • Prkm1
  • Prkm3
  • Ptpn11
  • Rps27a
  • Uba80
  • Ubb
  • Ubbl1
  • Ubc
  • Ubcep1
  • Ubcl1
Rattus norvegicus (Norway rat)
TGF-beta receptor signaling activates SMADs
  • Cbl
  • Fkbp1
  • Fkbp1a
  • Fur
  • Furin
  • Itga8
  • Itgav
  • Itgb1
  • Itgb3
  • Itgb5
  • Itgb6
  • Itgb8
  • Ltbp1
  • Ltbp2
  • Ltbp3
  • Ltbp4
  • Madh2
  • Madh3
  • Madh4
  • Nedd8
  • Pcsk3
  • Smad2
  • Smad3
  • Smad4
  • Tgf-b3
  • Tgfb1
  • Tgfb2
  • Tgfb3
  • Tgfbr1
  • Tgfbr2
  • Tgfbr3
  • Ube2m
  • Zfyve9
Rattus norvegicus (Norway rat)
Regulation of KIT signaling
  • Aps
  • Ash
  • Cbl
  • Fyn
  • Grb2
  • KIT
  • Kit
  • Kitl
  • Kitlg
  • Lck
  • Lyn
  • Mgf
  • Pkca
  • Prkca
  • Ptph6
  • Ptpn6
  • Sh2b2
  • Sos1
  • Src
  • Yes1
Rattus norvegicus (Norway rat)

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GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

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Supported by JST NBDC Grant Number JPMJND2204

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