GlyCosmos Portal

GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source	Last Updated
Reactome	March 20, 2024
ECODAB	April 1, 2019

Displaying entries **301 - 325** of **2090** in total

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Pathway Name ▼	Protein Name	UniProt ID	Gene Symbol	Organism
Synthesis of IPs in the nucleus	Inositol hexakisphosphate kinase 1 Inositol hexakisphosphate kinase 2 Inositol polyphosphate multikinase Inositol-pentakisphosphate 2-kinase	Q8NFU5 Q92551 Q9H8X2 Q9UHH9	C9orf12 IHPK1 IHPK2 IMPK IP6K1 IP6K2 IPMK IPPK KIAA0263	Homo sapiens (human)
Synthesis of IPs in the ER lumen	Multiple inositol polyphosphate phosphatase 1	Q9UNW1	MINPP1 MIPP	Homo sapiens (human)
Synthesis of IP3 and IP4 in the cytosol	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-2 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-3 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-4 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase epsilon-1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-2 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase zeta-1 5'-3' exonuclease PLD4 Calmodulin-1 Inositol polyphosphate 5-phosphatase OCRL Inositol-tetrakisphosphate 1-kinase Inositol-trisphosphate 3-kinase A Inositol-trisphosphate 3-kinase B Inositol-trisphosphate 3-kinase C Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1 Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 Phosphatidylinositol 4,5-bisphosphate 5-phosphatase A Synaptojanin-1 Type II inositol 1,4,5-trisphosphate 5-phosphatase	O15357 O43426 O75038 P0DP23 P16885 P19174 P23677 P27987 P32019 P51178 P60484 Q00722 Q01968 Q01970 Q13572 Q15147 Q15735 Q4KWH8 Q86YW0 Q8N3E9 Q92835 Q96BZ4 Q96DU7 Q9BRC7 Q9NQ66 Q9P212	C14orf175 CALM CALM1 CAM CAM1 INPP5B INPP5D INPP5J INPPL1 IP3KC ITPK1 ITPKA ITPKB ITPKC KIAA0450 KIAA0581 KIAA0910 KIAA1069 KIAA1516 KIAA1964 MMAC1 OCRL OCRL1 OCRL2 PIB5PA PIPP PLC1 PLCB1 PLCB2 PLCB3 PLCB4 PLCD1 PLCD3 PLCD4 PLCE PLCE1 PLCG1 PLCG2 PLCH1 PLCH2 PLCL3 PLCL4 PLCZ1 PLD4 PPLC PTEN SHIP SHIP1 SHIP2 SYNJ1 TEP1	Homo sapiens (human)
Synthesis of IP2, IP, and Ins in the cytosol	Inositol monophosphatase 1 Inositol monophosphatase 2 Inositol oxygenase Inositol polyphosphate 1-phosphatase Inositol polyphosphate 4-phosphatase type II Inositol polyphosphate 5-phosphatase OCRL Inositol polyphosphate-4-phosphatase type I A Inositol polyphosphate-5-phosphatase A Inositol-3-phosphate synthase 1 Myotubularin-related protein 7 Myotubularin-related protein 9 Phosphatidylinositol 4,5-bisphosphate 5-phosphatase A Synaptojanin-1 Type II inositol 1,4,5-trisphosphate 5-phosphatase	O14732 O15327 O43426 P29218 P32019 P49441 Q01968 Q14642 Q15735 Q96PE3 Q96QG7 Q9NPH2 Q9UGB7 Q9Y216	5PTASE ALDRL6 C8orf9 IMP.18P IMPA IMPA1 IMPA2 INO1 INPP1 INPP4A INPP4B INPP5A INPP5B INPP5J ISYNA1 KIAA0910 KSP32 MIOX MTMR7 MTMR8 MTMR9 OCRL OCRL1 OCRL2 PIB5PA PIPP RSOR SYNJ1	Homo sapiens (human)
Synthesis of Hepoxilins (HX) and Trioxilins (TrX)	Polyunsaturated fatty acid lipoxygenase ALOX12	P18054	12LO ALOX12 LOG12	Homo sapiens (human)
Synthesis of GDP-mannose	Mannose-1-phosphate guanyltransferase alpha Mannose-1-phosphate guanyltransferase beta Mannose-6-phosphate isomerase Phosphomannomutase 1 Phosphomannomutase 2	O15305 P34949 Q92871 Q96IJ6 Q9Y5P6	GMPPA GMPPB MPI PMI1 PMM1 PMM2 PMMH22	Homo sapiens (human)
Synthesis of Dolichyl-phosphate	Dehydrodolichyl diphosphate synthase complex subunit DHDDS Dehydrodolichyl diphosphate synthase complex subunit NUS1 Diphosphomevalonate decarboxylase Dolichol kinase Dolichyldiphosphatase 1 Polyprenol reductase	P53602 Q86SQ9 Q86YN1 Q96E22 Q9H8P0 Q9UPQ8	C6orf68 DHDDS DOLK DOLPP1 HDS KIAA1094 LSFR2 MPD MVD NGBR NUS1 SRD5A2L SRD5A3 TMEM15	Homo sapiens (human)
Synthesis of 5-eicosatetraenoic acids	Arachidonate 5-lipoxygenase-activating protein Glutathione peroxidase 1 Glutathione peroxidase 2 Leukotriene C4 synthase Phospholipid hydroperoxide glutathione peroxidase GPX4 Polyunsaturated fatty acid 5-lipoxygenase Serum paraoxonase/arylesterase 1 Serum paraoxonase/arylesterase 2 Serum paraoxonase/lactonase 3	P07203 P09917 P18283 P20292 P27169 P36969 Q15165 Q15166 Q16873	ALOX5 ALOX5AP FLAP GPX1 GPX2 GPX4 LOG5 LTC4S PON PON1 PON2 PON3	Homo sapiens (human)
Synthesis of 15-eicosatetraenoic acid derivatives	Glutathione peroxidase 1 Glutathione peroxidase 2 Phospholipid hydroperoxide glutathione peroxidase GPX4 Polyunsaturated fatty acid lipoxygenase ALOX15 Polyunsaturated fatty acid lipoxygenase ALOX15B Prostaglandin G/H synthase 2	O15296 P07203 P16050 P18283 P35354 P36969	ALOX15 ALOX15B COX2 GPX1 GPX2 GPX4 LOG15 PTGS2	Homo sapiens (human)
Synthesis of 12-eicosatetraenoic acid derivatives	Arachidonate 12-lipoxygenase, 12R-type Glutathione peroxidase 1 Glutathione peroxidase 2 Hydroperoxide isomerase ALOXE3 Phospholipid hydroperoxide glutathione peroxidase GPX4 Polyunsaturated fatty acid lipoxygenase ALOX12 Polyunsaturated fatty acid lipoxygenase ALOX15	O75342 P07203 P16050 P18054 P18283 P36969 Q9BYJ1	12LO ALOX12 ALOX12B ALOX15 ALOXE3 GPX1 GPX2 GPX4 LOG12 LOG15	Homo sapiens (human)
Synthesis of (16-20)-hydroxyeicosatetraenoic acids (HETE)	Cytochrome P450 1A1 Cytochrome P450 1A2 Cytochrome P450 1B1 Cytochrome P450 2C19 Cytochrome P450 2C8 Cytochrome P450 2C9 Cytochrome P450 2U1 Cytochrome P450 4A11 Cytochrome P450 4F2	P04798 P05177 P10632 P11712 P33261 P78329 Q02928 Q16678 Q7Z449	CYP1A1 CYP1A2 CYP1B1 CYP2C10 CYP2C19 CYP2C8 CYP2C9 CYP2U1 CYP4A11 CYP4A2 CYP4F2	Homo sapiens (human)
Synthesis and processing of ENV and VPU	Envelope glycoprotein gp160 Furin Protein Vpu	P04578 P05919 P09958	FUR FURIN PACE PCSK3 env vpu	Homo sapiens (human)
Synthesis And Processing Of GAG, GAGPOL Polyproteins	Gag polyprotein	P04591	gag	Homo sapiens (human)
Syndecan interactions	Alpha-actinin-1 Fibroblast growth factor 2 Integrin alpha-2 Integrin alpha-6 Integrin alpha-V Integrin beta-1 Integrin beta-3 Integrin beta-4 Integrin beta-5 Peripheral plasma membrane protein CASK Protein kinase C alpha type Syndecan-1 Syndecan-2 Syndecan-3 Syndecan-4 Tenascin Thrombospondin-1 Trafficking protein particle complex subunit 4 Transforming growth factor beta-1 proprotein Vitronectin	O14936 O75056 P01137 P04004 P05106 P05556 P06756 P07996 P09038 P12814 P16144 P17252 P17301 P18084 P18827 P23229 P24821 P31431 P34741 Q9Y296	ACTN1 CASK CD49B FGF2 FGFB FNRB GP3A HSPG1 HXB ITGA2 ITGA6 ITGAV ITGB1 ITGB3 ITGB4 ITGB5 KIAA0468 LIN2 MDF2 MSK12 MSK8 PKCA PRKACA PRKCA SBDN SDC SDC1 SDC2 SDC3 SDC4 TGFB TGFB1 THBS1 TNC TRAPPC4 TSP TSP1 VNRA VTN VTNR	Homo sapiens (human)
Synaptic adhesion-like molecules	Disks large homolog 1 Disks large homolog 3 Disks large homolog 4 Flotillin-1 Flotillin-2 Glutamate receptor 1 Glutamate receptor 3 Glutamate receptor 4 Glutamate receptor ionotropic, NMDA 1 Glutamate receptor ionotropic, NMDA 2A Glutamate receptor ionotropic, NMDA 2B Glutamate receptor ionotropic, NMDA 2C Glutamate receptor ionotropic, NMDA 2D Leucine-rich repeat and fibronectin type III domain-containing protein 1 Leucine-rich repeat and fibronectin type-III domain-containing protein 2 Leucine-rich repeat and fibronectin type-III domain-containing protein 3 Leucine-rich repeat and fibronectin type-III domain-containing protein 4 Receptor-type tyrosine-protein phosphatase F Receptor-type tyrosine-protein phosphatase S Receptor-type tyrosine-protein phosphatase delta Reticulon-3	O15399 O75955 O95197 P10586 P23468 P42261 P42263 P48058 P78352 Q05586 Q12879 Q12959 Q13224 Q13332 Q14254 Q14957 Q6PJG9 Q92796 Q9BTN0 Q9P244 Q9ULH4	ASYIP DLG1 DLG3 DLG4 ESA1 FLOT1 FLOT2 GLUA1 GLUH1 GLUR1 GLUR3 GLUR4 GLURC GRIA1 GRIA3 GRIA4 GRIN1 GRIN2A GRIN2B GRIN2C GRIN2D GluA3 GluA4 GluN2D KIAA1232 KIAA1246 KIAA1484 LAR LRFN1 LRFN2 LRFN3 LRFN4 M17S1 NMDAR1 NMDAR2A NMDAR2B NMDAR2C NMDAR2D NSPL2 PSD95 PTPRD PTPRF PTPRS RTN3 SALM1 SALM2 SALM3 SALM4	Homo sapiens (human)
Switching of origins to a post-replicative state	DNA replication factor Cdt1 DNA replication licensing factor MCM2 DNA replication licensing factor MCM3 DNA replication licensing factor MCM4 DNA replication licensing factor MCM5 DNA replication licensing factor MCM6 DNA replication licensing factor MCM7 Geminin	O75496 P25205 P33991 P33992 P33993 P49736 Q14566 Q9H211	BM28 CCNL1 CDC21 CDC46 CDC47 CDCL1 CDT1 GMNN KIAA0030 MCM2 MCM3 MCM4 MCM5 MCM6 MCM7	Homo sapiens (human)
Surfactant metabolism	Adenosine deaminase 2 Adenosine receptor A2a Adenosine receptor A2b Adhesion G protein-coupled receptor F5 Alpha-2A adrenergic receptor Alpha-2C adrenergic receptor Cytokine receptor common subunit beta Cytoskeleton-associated protein 4 Deleted in malignant brain tumors 1 protein Granulocyte-macrophage colony-stimulating factor receptor subunit alpha LIM and cysteine-rich domains protein 1 Napsin-A P2Y purinoceptor 2 Palmitoyltransferase ZDHHC2 Pepsin A-3 Pepsin A-4 Pepsin A-5 Phospholipid-transporting ATPase ABCA3 Pro-cathepsin H Pulmonary surfactant-associated protein A1 Pulmonary surfactant-associated protein A2 Pulmonary surfactant-associated protein B Pulmonary surfactant-associated protein D Sodium-dependent phosphate transport protein 2A Sodium-dependent phosphate transport protein 2B Surfactant protein C Surfactant-associated protein 3 Thyroid transcription factor 1-associated protein 26 Transcription factor GATA-6 Transcription termination factor 1	O95436 O96009 P07988 P08913 P09668 P0C7M3 P0DJD7 P0DJD8 P0DJD9 P11686 P15509 P18825 P29274 P29275 P32927 P35247 P41231 Q06495 Q07065 Q15361 Q8IWL1 Q8IWL2 Q8IZF2 Q92908 Q99758 Q9NZK5 Q9NZU5 Q9P031 Q9UGM3 Q9UIJ5	ABC3 ABCA3 ADA2 ADGF ADGRF5 ADORA2 ADORA2A ADORA2B ADRA2A ADRA2C ADRA2L2 ADRA2R ADRA2RL2 ADRAR BR22 CCDC59 CECR1 CKAP4 COLEC4 COLEC5 COLEC7 CPSB CSF2R CSF2RA CSF2RB CSF2RY CTSH DMBT1 GATA6 GP340 GPR116 IDGFL IL3RB IL5RB KIAA0758 LMCD1 NAP1 NAPA NAPSA NPT2 P2RU1 P2RY2 PGA3 PGA4 PGA5 PSAP PSPD REAM REC SFTA3 SFTP1 SFTP2 SFTP3 SFTP4 SFTPA SFTPA1 SFTPA1B SFTPA2 SFTPA2B SFTPB SFTPC SFTPD SFTPH SLC17A2 SLC34A1 SLC34A2 TAP26 TTF1 ZDHHC2 ZNF372	Homo sapiens (human)
Suppression of autophagy	Dual specificity protein phosphatase 16 N-acetyltransferase Eis Phosphatidylinositol-3-phosphatase Ras-related protein Rab-7a	O53361 P51149 P9WFK7 Q9BY84	DUSP16 KIAA1700 MKP7 RAB7 RAB7A eis sapM	Homo sapiens (human)
Suppression of apoptosis	Apoptosis inhibitor Rv3654c Apoptosis inhibitor Rv3655c Cathepsin G E3 ubiquitin-protein ligase RNF213 Glycogen synthase kinase-3 alpha Low molecular weight protein-tyrosine phosphatase A Mitogen-activated protein kinase 1 Mitogen-activated protein kinase 3 Possible Mce-family lipoprotein LprM (Mce-family lipoprotein Mce3E) Serine protease inhibitor Rv3364c Splicing factor, proline- and glutamine-rich Zinc finger protein RFP	O50393 O53971 O69622 O69623 P08311 P14373 P23246 P27361 P28482 P49840 P9WIA1 Q63HN8	ALO17 C17orf27 CTSG ERK1 ERK2 GSK3A KIAA1554 KIAA1618 MAPK1 MAPK3 MYSTR PRKM1 PRKM2 PRKM3 PSF RFP RNF213 RNF76 Rv3364c Rv3654c Rv3655c SFPQ TRIM27 lprM mce3E mptpA ptpA	Homo sapiens (human)
Sunitinib-resistant PDGFR mutants	Platelet-derived growth factor receptor alpha	P16234	PDGFR2 PDGFRA RHEPDGFRA	Homo sapiens (human)
Sunitinib-resistant KIT mutants	Mast/stem cell growth factor receptor Kit	P10721	KIT SCFR	Homo sapiens (human)
Sulfur amino acid metabolism	Adenosylhomocysteinase Betaine--homocysteine S-methyltransferase 1 Methionine synthase reductase Methionine synthase S-adenosylmethionine synthase isoform type-1 S-methylmethionine--homocysteine S-methyltransferase BHMT2	P23526 Q00266 Q93088 Q99707 Q9H2M3 Q9UBK8	AHCY AMS1 BHMT BHMT2 MAT1A MATA1 MTR MTRR SAHH	Homo sapiens (human)
Sulfide oxidation to sulfate	Mitochondrial dicarboxylate carrier Persulfide dioxygenase ETHE1, mitochondrial Sulfide Sulfite oxidase, mitochondrial Thiosulfate sulfurtransferase Thiosulfate	O95571 P51687 Q16762 Q8NFU3 Q9UBX3 Q9Y6N5	DIC ETHE1 HSCO KAT SLC25A10 SQOR SQRDL SUOX TST TSTD1	Homo sapiens (human)
Succinyl-CoA Biosynthesis	2-oxoglutarate dehydrogenase complex component E1 Alpha-ketoglutarate dehydrogenase component 4 Dihydrolipoyl dehydrogenase, mitochondrial Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial	P09622 P36957 P82909 Q02218	DLD DLST DLTS GCSL KGD4 LAD MRPS36 OGDH PHE3	Homo sapiens (human)
Striated Muscle Contraction	Alpha-actinin-2 Alpha-actinin-3 Desmin Dystrophin Myosin light chain 1/3, skeletal muscle isoform Myosin light chain 3 Myosin light chain 4 Myosin regulatory light chain 2, ventricular/cardiac muscle isoform Myosin-3 Myosin-6 Myosin-8 Myosin-binding protein C, cardiac-type Myosin-binding protein C, fast-type Myosin-binding protein C, slow-type Nebulin Telethonin Titin Tropomodulin-1 Tropomodulin-2 Tropomodulin-3 Tropomodulin-4 Tropomyosin alpha-1 chain Tropomyosin alpha-3 chain Tropomyosin alpha-4 chain Tropomyosin beta chain Troponin C, skeletal muscle Troponin C, slow skeletal and cardiac muscles Troponin I, cardiac muscle Troponin I, fast skeletal muscle Troponin I, slow skeletal muscle Troponin T, cardiac muscle Troponin T, fast skeletal muscle Troponin T, slow skeletal muscle Vimentin	O15273 P02585 P05976 P06753 P07951 P08590 P08670 P09493 P10916 P11055 P11532 P12829 P13533 P13535 P13805 P17661 P19237 P19429 P20929 P28289 P35609 P45378 P45379 P48788 P63316 P67936 Q00872 Q08043 Q14324 Q14896 Q8WZ42 Q9NYL9 Q9NZQ9 Q9NZR1	ACTN2 ACTN3 C15orf13 D9S57E DES DMD MLC1 MLC2 MYBPC1 MYBPC2 MYBPC3 MYBPCF MYBPCS MYH3 MYH6 MYH8 MYHCA MYL1 MYL2 MYL3 MYL4 NEB NTMOD TCAP TMOD TMOD1 TMOD2 TMOD3 TMOD4 TMSA TMSB TNNC TNNC1 TNNC2 TNNI1 TNNI2 TNNI3 TNNT1 TNNT2 TNNT3 TNT TPM1 TPM2 TPM3 TPM4 TTN VIM	Homo sapiens (human)

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