GlyCosmos Portal

GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source	Last Updated
Reactome	March 20, 2024
ECODAB	April 1, 2019

Displaying entries **901 - 925** of **1070** in total

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Pathway Name	Protein Name	UniProt ID ▼	Gene Symbol	Organism	GlyTouCan ID
Regulation of TP53 Activity through Phosphorylation	5'-AMP-activated protein kinase catalytic subunit alpha-1 5'-AMP-activated protein kinase subunit beta-1 5'-AMP-activated protein kinase subunit beta-2 5'-AMP-activated protein kinase subunit gamma-1 ATR interacting protein Aurora kinase A Aurora kinase B BRCA1 interacting helicase 1 BRCA1-associated RING domain protein 1 Breast cancer type 1 susceptibility protein homolog Casein kinase II subunit alpha Casein kinase II subunit alpha Casein kinase II subunit beta Cell cycle checkpoint control protein RAD9B Cell cycle checkpoint control protein Cellular tumor antigen p53 Checkpoint protein Cyclin-A1 Cyclin-A2 Cyclin-dependent kinase 2 Cyclin-dependent kinase 5 activator 1 Cyclin-dependent kinase 5 DNA 3'-5' helicase DNA 3'-5' helicase DNA endonuclease RBBP8 DNA repair protein RAD50 DNA replication ATP-dependent helicase/nuclease DNA2 DNA topoisomerase II binding protein 1 DNA topoisomerase Double-strand break repair protein MRE11 E3 ubiquitin-protein ligase Mdm2 Exonuclease 1 FACT complex subunit SSRP1 FACT complex subunit Histone acetyltransferase KAT5 Homeodomain-interacting protein kinase 1 MAPK activated protein kinase 5 Mapk11 protein Mitogen-activated protein kinase 14 NOC2-like nucleolar associated transcriptional repressor Nibrin Polyubiquitin-B Polyubiquitin-C Protein Mdm4 Protein kinase AMP-activated non-catalytic subunit gamma 2 Protein kinase AMP-activated non-catalytic subunit gamma 3 RAD1 checkpoint DNA exonuclease RAD17 checkpoint clamp loader component RAD9, HUS1, RAD1-interacting nuclear orphan protein 1 RecQ mediated genome instability 2 RecQ-mediated genome instability protein 1 Replication factor C subunit 2 Replication factor C subunit 3 Replication factor C subunit 4 Replication factor C subunit 5 Replication protein A 32 kDa subunit Replication protein A subunit Replication protein A3 Serine-protein kinase ATM Serine/threonine-protein kinase ATR Serine/threonine-protein kinase Chk1 Serine/threonine-protein kinase PLK3 Serine/threonine-protein kinase STK11 TAF7-like RNA polymerase II, TATA box binding protein (TBP)-associated factor, pseudogene 1 TATA-box binding protein associated factor 13 TATA-box binding protein associated factor 15 TATA-box binding protein associated factor 4 TATA-box binding protein associated factor 4b TATA-box binding protein associated factor 5 TATA-box-binding protein TPX2, microtubule nucleation factor Transcription initiation factor TFIID subunit 11 Transcription initiation factor TFIID subunit 12 Transcription initiation factor TFIID subunit 2 Transcription initiation factor TFIID subunit 6 Transcription initiation factor TFIID subunit 7 Transcription initiation factor TFIID subunit 9 Transcription initiation factor TFIID subunit 9B Transcription initiation factor TFIID subunit Ubiquitin B-like Ubiquitin-ribosomal protein eS31 fusion protein dual-specificity kinase non-specific serine/threonine protein kinase non-specific serine/threonine protein kinase non-specific serine/threonine protein kinase	A0A0G2JVY9 A0A0G2K475 A0A0G2K4W8 A0A0G2K849 A0A140UHX4 A0A8I5ZJ57 A0A8I6A014 A0A8I6A5Y3 A0A8I6A7M0 A0A8I6A9T0 A0A8I6ABQ9 A0A8I6G5V3 A0A8I6GFZ6 A4L9P5 B0BN78 B1WC58 B2RYG5 B2RYQ7 B4F778 B5DF29 D3Z822 D3ZA78 D3ZC52 D3ZCD7 D3ZG52 D3ZH66 D3ZHX4 D3ZL21 D3ZNA8 D3ZQN8 D3ZQW1 D3ZXM2 D4A3U7 D4A4M3 D4A6J4 D4A7E4 D4A845 D4ACL8 D4AE59 E9PTF3 E9PTL1 F1LN87 F1LNY6 F1LT11 F1LTH9 F1LV83 F1LYY7 F7FH41 O54952 O55099 P0CG51 P10361 P19139 P54645 P59241 P61810 P62982 P67874 P70618 P80385 P80386 Q03114 Q04931 Q499V3 Q5BKE0 Q5M830 Q5U1X0 Q5XIN1 Q62880 Q63429 Q63528 Q63699 Q63801 Q641W4 Q6AY13 Q6AY26 Q7TP21 Q91ZN7 Q99MK2 Q9JIL8 Q9JIL9 Q9JIM0 Q9QZH2 Q9QZH4 Q9R011	Aik Aik2 Aim1 Airk1 Airk2 Ampk1 Ark1 Ark2 Atm Atr Atrip Aura Aurka Aurkb Ayk1 Bard1 Blm Brca1 Brip1 Btak Ccna1 Ccna2 Cdk2 Cdk5 Cdk5r Cdk5r1 Cdkn2 Cdkn5 Chek1 Chk1 Ciidbp Ck2n Cnk Csbp1 Csbp2 Csnk2a1 Csnk2a2 Csnk2b Ctip Dn7 Dna2 Dyrk2 Exo1 Fnk Hipk1 Htatip Hus1 Iak1 Kat5 LOC100360645 LOC685619 Lkb1 Mapk11 Mapk14 Mapkapk5 Mdm2 Mdm4 Mdmx Mre11 Mre11a Nbn Nbs1 Noc2l Nuak1 P53 PSSALRE Plk3 Prkaa1 Prkab1 Prkab2 Prkag1 Prkag2 Prkag3 RGD1564788 Rad1 Rad17 Rad50 Rad9a Rad9b Rbbp8 Rfc2 Rfc3 Rfc4 Rfc5 Rhno1 Rmi1 Rmi2 Rpa1 Rpa2 Rpa3 Rps27a Ssrp1 Stk1 Stk11 Stk12 Stk15 Stk5 Stk6 Supt16h Taf1 Taf11 Taf12 Taf13 Taf15 Taf2 Taf2e Taf2g Taf4 Taf4b Taf5 Taf6 Taf7 Taf7l-ps1 Taf9 Taf9b Taf9l Tafii31 Tbp Tip60 Tip60b Top3a Topbp1 Tp53 Tp53rk Tp53rka Tp53rkb Tpx2 Trp53rka Trp53rkb Uba80 Ubb Ubbl1 Ubc Ubcep1 Ubcl1 Wrn	Rattus norvegicus (Norway rat)
Senescence-Associated Secretory Phenotype (SASP)	Anaphase promoting complex subunit 1 Anaphase promoting complex subunit 7 Anaphase-promoting complex subunit 15 Anaphase-promoting complex subunit 16 Anaphase-promoting complex subunit 2 Anaphase-promoting complex subunit 4 Anaphase-promoting complex subunit 5 Anaphase-promoting complex subunit CDC26 CCAAT/enhancer-binding protein beta Cell division cycle 16 Cell division cycle 23 Cell division cycle protein 27 homolog Cyclin dependent kinase inhibitor 2D Cyclin-A1 Cyclin-A2 Cyclin-dependent kinase 2 Cyclin-dependent kinase 4 inhibitor B Cyclin-dependent kinase 4 Cyclin-dependent kinase 6 Cyclin-dependent kinase inhibitor 1A Cyclin-dependent kinase inhibitor 1B E2 ubiquitin-conjugating enzyme Euchromatic histone lysine methyltransferase 1 Euchromatic histone lysine methyltransferase 2 Fizzy and cell division cycle 20 related 1 Histone H2A type 2-A Histone H2A.J Histone H2A Histone H2A Histone H2A Histone H2A Histone H2A Histone H2A Histone H2B type 1-A Histone H2B Histone H2B Histone H2B Histone H2B Histone H2B Histone H2B Histone H2B Histone H3.1 Histone H3.3 Histone H3 Histone H4 Mitogen-activated protein kinase 1 Mitogen-activated protein kinase 3 Mitogen-activated protein kinase 7 Polyubiquitin-B Polyubiquitin-C Ribosomal protein S6 kinase alpha-1 Ribosomal protein S6 kinase Ribosomal protein S6 kinase Ubiquitin B-like Ubiquitin-conjugating enzyme E2 C Ubiquitin-conjugating enzyme E2 D1 Ubiquitin-conjugating enzyme E2 S Ubiquitin-ribosomal protein eS31 fusion protein	A0A0G2JVY9 A0A0G2JXI9 A0A0G2K889 A0A8I5ZSA8 A0A8I5ZYY0 A0A8I5ZZ18 A0A8I6A2W1 A0A8I6A4J8 A0A8I6A5Y3 A0A8I6A7P3 A0A8I6AE10 A0A8I6AFW8 A0A8I6ANL9 A0A8I6AR08 A0A8I6AWJ2 A0A8I6AWT3 A0A8I6G659 A0A8J8XWH8 A1L1K3 A9UMV8 B1WCA1 B5DFI8 D3ZDK2 D3ZDN9 D3ZIT4 D3ZJ08 D3ZQX4 D3ZUB7 D3ZUW6 D3ZVK7 D3ZXP3 D4ACM0 F1M3L4 F1MA87 F7EWF8 G3V9C7 M0RBQ5 O08769 P0C865 P0CC09 P0CG51 P21272 P21708 P35426 P55272 P62804 P62982 P63086 P84245 Q00729 Q4V8A2 Q63429 Q63531 Q63699 Q6AY13 Q6LED0 Q6P4Z7 Q6YDN7	Anapc1 Anapc15 Anapc16 Anapc2 Anapc4 Anapc5 Anapc7 Bmk1 Ccna1 Ccna2 Cdc16 Cdc23 Cdc26 Cdc27 Cdk2 Cdk4 Cdk6 Cdkn1a Cdkn1b Cdkn2 Cdkn2b Cdkn2d Cebpb Crp2 ENSRNOG00000062927 ENSRNOG00000064540 ENSRNOG00000066901 ENSRNOG00000068034 Ehmt1 Ehmt2 Erk1 Erk2 Erk5 Fzr1 H2ab3 H2ac10 H2ac18 H2ac4 H2afb3 H2afx H2aj H2ax H2az2 H2bc1 H2bc12l1 H2bc6 H2bcl1 H2bcl2 H2bu1 H3-3b H3.3b H3c13 H3f3b H4c16 H4c2 H4f16 H4ft Hist1h2ba Hist1h2bc Hist1h2bg Hist1h2bo Hist1h2bq Hist1h4b Hist1h4m Hist2h2aa3 Hist2h3c2 Hist4 Hist4h4 Ink4 LOC100360645 LOC100365043 LOC100366017 LOC100910200 LOC120097726 LOC684797 Mapk Mapk1 Mapk3 Mapk7 Mapkapk1a Nf-il6 Prkm1 Prkm3 Rps27a Rps6ka1 Rps6ka2 Rps6ka3 Rsk1 Sfb Th2b Uba80 Ubb Ubbl1 Ubc Ubcep1 Ubcl1 Ube2c Ube2d1 Ube2e1 Ube2s p27Kip1	Rattus norvegicus (Norway rat)
Telomere Extension By Telomerase	ATP-dependent DNA helicase PIF1 Adrenocortical dysplasia protein homolog Ankyrin repeat domain 28 Cyclin-A1 Cyclin-A2 Cyclin-dependent kinase 2 H/ACA ribonucleoprotein complex subunit 1 H/ACA ribonucleoprotein complex subunit DKC1 Nucleolar protein 10 Protection of telomeres protein 1 Protein SHQ1 homolog Protein phosphatase 6, regulatory subunit 3 Regulator of telomere elongation helicase 1 Serine/threonine-protein phosphatase 6 catalytic subunit Telomerase Cajal body protein 1 Telomerase reverse transcriptase Telomeric repeat-binding factor 2-interacting protein 1 Telomeric repeat-binding factor	A0A0G2JVY9 A0A0G2JX31 A0A8I6GHK6 B4F784 D3ZJF7 D3ZMP6 F1MAH5 P40615 Q1HG60 Q4FZR5 Q5EAN7 Q5RJZ1 Q5XII5 Q63699 Q64620 Q673L6 Q6AY13 Q6AYA1	Acd Ankrd28 Ccna1 Ccna2 Cdk2 Cdkn2 Dkc1 Gar1 LOC100360065 Nap57 Nola1 Nop10 Pif1 Pot1 Ppp6c Ppp6r3 Ppp6r3-ps1 Ppv Rap1 Rtel1 Saps3-ps1 Shq1 Tcab1 Terf2 Terf2ip Tert Wdr79 Wrap53	Rattus norvegicus (Norway rat)
Scavenging of heme from plasma	Albumin Apolipoprotein A-I Apolipoprotein L 11a Apolipoprotein L 9a Apolipoprotein L, 2 Apolipoprotein L3-like CD163 molecule Haptoglobin Hemoglobin subunit alpha-1/2 Hemoglobin subunit beta-1 Hemopexin Ig kappa chain V-II region RPMI 6410-like Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Immunoglobulin V-set domain-containing protein Immunoglobulin V-set domain-containing protein Immunoglobulin V-set domain-containing protein Immunoglobulin heavy variable V12-3 Immunoglobulin kappa variable like, pseudogene 6 Immunoglobulin lambda constant 1 Immunoglobulin lambda-like polypeptide 1 Joining chain of multimeric IgA and IgM MCG142154-like Prolow-density lipoprotein receptor-related protein 1 Protein AMBP Similar to apolipoprotein L2; apolipoprotein L-II Similar to immunoglobulin light chain variable region Similar to immunoglobulin light chain Uncharacterized LOC108351606 Uncharacterized protein	A0A0G2JVY2 A0A0G2JW41 A0A0G2JXY3 A0A0G2JY98 A0A0G2JZL1 A0A0G2K066 A0A0G2K180 A0A0G2K3L5 A0A0G2K7F8 A0A0G2K828 A0A0G2K8K8 A0A0G2K980 A0A0G2K9L1 A0A0G2K9Z5 A0A8I5Y130 A0A8I5Y662 A0A8I5Y735 A0A8I5Y7P7 A0A8I5Y806 A0A8I5Y9R1 A0A8I5Y9S1 A0A8I5YBU3 A0A8I5YC48 A0A8I5ZLU0 A0A8I5ZMM5 A0A8I5ZN60 A0A8I5ZNF0 A0A8I5ZNL8 A0A8I5ZNW4 A0A8I5ZPH3 A0A8I5ZRU2 A0A8I5ZTK7 A0A8I5ZVJ7 A0A8I5ZX10 A0A8I5ZX42 A0A8I5ZY02 A0A8I5ZYE2 A0A8I5ZYV4 A0A8I6A2E5 A0A8I6A3F2 A0A8I6A6C3 A0A8I6A7L1 A0A8I6A935 A0A8I6A938 A0A8I6A9W1 A0A8I6AA60 A0A8I6AAM9 A0A8I6ABH0 A0A8I6AC42 A0A8I6ACJ3 A0A8I6ACY1 A0A8I6AD89 A0A8I6AEB7 A0A8I6AEV5 A0A8I6AFL1 A0A8I6AFR0 A0A8I6AGR0 A0A8I6AH36 A0A8I6AHB9 A0A8I6AHQ4 A0A8I6AHX0 A0A8I6AI41 A0A8I6AII9 A0A8I6AJ98 A0A8I6AJF8 A0A8I6AK51 A0A8I6AKK2 A0A8I6ALZ6 A0A8I6AM09 A0A8I6AMX1 A0A8I6ANN1 A0A8I6AP25 A0A8I6AQD7 A0A8I6ASD7 A0A8I6AVW1 A0A8I6G3M2 A0A8I6G5V5 A0A8I6G7J3 A0A8I6G8Z3 A0A8I6GC23 A0A8I6GE36 A0A8I6GHG7 A0A8I6GL55 A0A8I6GLJ8 D3ZE08 D3ZMS7 D3ZMY4 D3ZPL2 F1LWD0 F1LYF1 F1LYU3 F1M512 F1M7B3 F1MAM7 G3V6G1 G3V928 M0R5K1 M0R7F5 M0RBD5 M0RBH1 M0RDZ5 P01946 P02091 P02770 P04639 P06866 P20059 Q5XIB6 Q64240	AABR07034730.2 AABR07058479.1 AABR07060971.1 AABR07061001.1 AABR07065782.1 AABR07065808.1 AABR07065812.2 AABR07065813.1 Alb Ambp Apoa1 Apol11a Apol2 Apol7a Apol7b Apol9a Cd163 ENSRNOG00000062324 ENSRNOG00000062682 ENSRNOG00000062762 ENSRNOG00000062853 ENSRNOG00000062915 ENSRNOG00000062976 ENSRNOG00000063148 ENSRNOG00000063329 ENSRNOG00000063340 ENSRNOG00000063341 ENSRNOG00000063422 ENSRNOG00000063550 ENSRNOG00000063572 ENSRNOG00000063707 ENSRNOG00000063791 ENSRNOG00000064041 ENSRNOG00000064061 ENSRNOG00000064085 ENSRNOG00000064245 ENSRNOG00000064481 ENSRNOG00000064582 ENSRNOG00000065160 ENSRNOG00000065181 ENSRNOG00000065191 ENSRNOG00000065237 ENSRNOG00000065406 ENSRNOG00000065564 ENSRNOG00000065629 ENSRNOG00000065670 ENSRNOG00000065675 ENSRNOG00000065690 ENSRNOG00000065855 ENSRNOG00000066010 ENSRNOG00000066072 ENSRNOG00000066203 ENSRNOG00000066380 ENSRNOG00000066406 ENSRNOG00000066431 ENSRNOG00000066785 ENSRNOG00000066812 ENSRNOG00000066814 ENSRNOG00000066904 ENSRNOG00000066922 ENSRNOG00000066926 ENSRNOG00000066971 ENSRNOG00000067010 ENSRNOG00000067025 ENSRNOG00000067233 ENSRNOG00000067273 ENSRNOG00000067516 ENSRNOG00000067603 ENSRNOG00000067643 ENSRNOG00000067679 ENSRNOG00000067883 ENSRNOG00000068055 ENSRNOG00000068059 ENSRNOG00000068381 ENSRNOG00000068499 ENSRNOG00000068847 ENSRNOG00000069193 ENSRNOG00000069427 ENSRNOG00000069491 ENSRNOG00000069766 ENSRNOG00000069828 ENSRNOG00000069901 ENSRNOG00000069940 ENSRNOG00000070091 ENSRNOG00000070192 ENSRNOG00000070244 ENSRNOG00000070247 ENSRNOG00000070810 ENSRNOG00000070812 ENSRNOG00000070816 ENSRNOG00000070832 ENSRNOG00000070933 ENSRNOG00000071049 ENSRNOG00000071091 Hba-a1 Hba1 Hbb Hp Hpx Igkv2-112l1 Igkv8-30l1 Igkvl-ps6 Igkvl10 Igkvl12 Igkvl13 Igkvl2 Iglc1 Igll1 Itil Jchain LOC100363522 LOC100365500 LOC100911032 LOC102551948 LOC120093819 LOC503164 LOC690813 Lrp1 RGD1309808 RGD1561722 RGD1564696	Rattus norvegicus (Norway rat)
TGF-beta receptor signaling activates SMADs	E3 ubiquitin-protein ligase CBL Furin Integrin beta-1 Integrin beta-3 Integrin beta-6 Integrin beta Integrin beta Integrin subunit alpha 8 Integrin subunit alpha V Latent transforming growth factor beta binding protein 3 Latent transforming growth factor beta binding protein 4 Latent-transforming growth factor beta-binding protein 1 Latent-transforming growth factor beta-binding protein 2 Mothers against decapentaplegic homolog 2 Mothers against decapentaplegic homolog 3 Mothers against decapentaplegic homolog 4 NEDD8 Peptidyl-prolyl cis-trans isomerase FKBP1A TGF-beta receptor type-1 TGF-beta receptor type-2 Transforming growth factor beta receptor type 3 Transforming growth factor beta-1 proprotein Transforming growth factor beta-2 proprotein Transforming growth factor beta-3 proprotein Ubiquitin-conjugating enzyme E2M Zinc finger FYVE domain-containing protein	A0A0G2JVU1 A0A8I5ZYZ8 A0A8I6AQL1 A0A8I6AVC5 A0A8I6G3R2 D3ZDC7 D4A917 F1LZX9 F7F1E3 O35806 O70436 O70437 P17246 P23377 P26342 P38438 P49134 P80204 P84025 Q00918 Q07257 Q07258 Q62658 Q6AYF4 Q71UE8 Q8R2H2	Cbl Fkbp1 Fkbp1a Fur Furin Itga8 Itgav Itgb1 Itgb3 Itgb5 Itgb6 Itgb8 Ltbp1 Ltbp2 Ltbp3 Ltbp4 Madh2 Madh3 Madh4 Nedd8 Pcsk3 Smad2 Smad3 Smad4 Tgf-b3 Tgfb1 Tgfb2 Tgfb3 Tgfbr1 Tgfbr2 Tgfbr3 Ube2m Zfyve9	Rattus norvegicus (Norway rat)
Molecules associated with elastic fibres	Aa1018 Bone morphogenetic protein 10 Bone morphogenetic protein 2 Bone morphogenetic protein 4 Bone morphogenetic protein 7 EGF containing fibulin extracellular matrix protein 2 Fibulin 2 Fibulin-5 Growth differentiation factor 5 Integrin beta-1 Integrin beta-3 Integrin beta-6 Integrin beta Integrin beta Integrin subunit alpha 8 Integrin subunit alpha V Latent transforming growth factor beta binding protein 3 Latent transforming growth factor beta binding protein 4 Latent-transforming growth factor beta-binding protein 1 Latent-transforming growth factor beta-binding protein 2 Microfibril associated protein 2 Microfibril associated protein 4 Microfibril associated protein 5 Transforming growth factor beta-1 proprotein Transforming growth factor beta-2 proprotein Transforming growth factor beta-3 proprotein	A0A0G2JVU1 A0A0G2K9S8 A0A8I5ZYG7 A0A8I6AQL1 A0A8I6AVC5 D3Z952 D4A7W8 D4A917 F1LZX9 F7F1E3 G3V6W8 G3V6X1 M0RAY4 O35806 P17246 P49001 P49134 Q00918 Q06826 Q07257 Q07258 Q4AEG6 Q6AYF4 Q7TQ11 Q8R2H2 Q9WVH8	Bmp-2 Bmp-4 Bmp10 Bmp2 Bmp4 Bmp7 Dance Dvr-4 Efemp2 Fbln2 Fbln5 Gdf5 Itga8 Itgav Itgb1 Itgb3 Itgb5 Itgb6 Itgb8 Ltbp1 Ltbp2 Ltbp3 Ltbp4 Mfap2 Mfap4 Mfap5 Tgf-b3 Tgfb1 Tgfb2 Tgfb3 Vtn	Rattus norvegicus (Norway rat)
Glycosphingolipid catabolism	Acid ceramidase Alpha-galactosidase Arylsulfatase A Arylsulfatase B Arylsulfatase E Arylsulfatase G Arylsulfatase I Arylsulfatase K Arylsulfatase family, member J Beta-galactosidase-1-like protein 3 Beta-galactosidase Beta-galactosidase Beta-hexosaminidase subunit alpha Beta-hexosaminidase subunit beta Carboxypeptidase Cation-dependent mannose-6-phosphate receptor Ectonucleotide pyrophosphatase/phosphodiesterase family member 7 Galactocerebrosidase Galactosidase, beta 1-like Ganglioside GM2 activator Glucosylceramidase beta 3 Glucosylceramidase Neutral ceramidase Non-lysosomal glucosylceramidase Prosaposin Sialidase-1 Sialidase-2 Sialidase-3 Sphingomyelin phosphodiesterase 2 Sphingomyelin phosphodiesterase 3 Sphingomyelin phosphodiesterase 4 Sphingomyelin phosphodiesterase Steryl-sulfatase Sulfatase modifying factor 1 Sulfatase modifying factor 2 exo-alpha-sialidase	A0A0G2JVP8 A0A1W2Q645 A0A8I5Y144 A0A8I6A5G9 A0A8I6AML4 A0A8I6ARV9 A0A8I6B4V4 B1WBS6 D3ZJF9 D3ZUM4 D3ZWB7 D4A7I8 F7ETC0 M0R3L8 O35049 P10960 P15589 P50430 Q32KJ2 Q32KJ7 Q32KJ8 Q32KJ9 Q32KK0 Q32KK2 Q5EZ72 Q5M868 Q5XIL5 Q641X3 Q64627 Q6AXR4 Q6AY20 Q6P7S1 Q91XT9 Q99PW3 Q99PW5 Q9ET64	AABR07013255.1 Arsa Arsb Arse Arsg Arsi Arsj Arsk Arsl Asah1 Asah2 Cca1 Ctsa Enpp7 Galc Gba Gba1 Gba2 Gba3 Gla Glb1 Glb1l Glb1l2 Glb1l3 Gm2a Hexa Hexb M6pr Neu1 Neu2 Neu3 Neu4 Psap Sgp1 Smpd1 Smpd2 Smpd3 Smpd4 Sts Sumf1 Sumf2	Rattus norvegicus (Norway rat)	G09546QO G27025MB G58161NS
Deadenylation of mRNA	Eukaryotic initiation factor 4A-I Eukaryotic initiation factor 4A-II Eukaryotic initiation factor 4A-III Eukaryotic translation initiation factor 4 gamma 1 Eukaryotic translation initiation factor 4E PAN2-PAN3 deadenylation complex catalytic subunit Pan2 PAN2-PAN3 deadenylation complex subunit PAN3 Poly(A) binding protein interacting protein 1 Polyadenylate-binding protein 1	A0A0G2JVP5 D4ADM2 F7F7A6 M0RD03 P63074 Q3B8Q2 Q5RKI1 Q6IE70 Q9EPH8	Ddx48 Eif4a1 Eif4a2 Eif4a3 Eif4e Eif4g1 PAN3 Pabp1 Pabpc1 Paip1 Pan2 Pan3 Usp52	Rattus norvegicus (Norway rat)
Nuclear Envelope Breakdown	Barrier-to-autointegration factor Emerin RNA binding motif protein 39 non-specific serine/threonine protein kinase non-specific serine/threonine protein kinase	A0A0G2JVP1 A0A8I5XW39 A0A8J8XIU8 Q63190 Q9R1T1	Baf Banf1 Emd L2bp1 Rbm39 Vrk1 Vrk2	Rattus norvegicus (Norway rat)
Initiation of Nuclear Envelope (NE) Reformation	Ankyrin repeat and LEM domain-containing protein 2 Barrier-to-autointegration factor Cyclin-dependent kinase 1 Delta(14)-sterol reductase LBR Emerin G2/mitotic-specific cyclin-B1 G2/mitotic-specific cyclin-B2 G2/mitotic-specific cyclin-B2 Importin subunit beta-1 Lamin-B1 NAD-dependent protein deacetylase sirtuin-2 Prelamin-A/C Protein phosphatase 2 scaffold subunit A alpha RNA binding motif protein 39 Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform non-specific serine/threonine protein kinase non-specific serine/threonine protein kinase	A0A0G2JVP1 A0A8I5XW39 A0A8I6A3R0 A0A8I6AEP6 A0A8J8XIU8 P30277 P36876 P39951 P48679 P52296 P63331 P70615 Q5M857 Q5RJQ4 Q5XI34 Q63190 Q7TP65 Q9R1T1	AABR07021955.1 Ankle2 Baf Banf1 Ccnb1 Ccnb2 Ccnb2-ps2 Cdc2 Cdc2a Cdk1 Cdkn1 Emd Kpnb1 L2bp1 Lbr Lem4 Lmn1 Lmna Lmnb1 Ppp2ca Ppp2r1a Ppp2r2a Rbm39 Sir2l2 Sirt2 Vrk1 Vrk2	Rattus norvegicus (Norway rat)
RHOG GTPase cycle	10 kDa heat shock protein, mitochondrial ADP-ribosylation factor GTPase-activating protein 3 Ankyrin repeat and LEM domain-containing protein 2 Caveolin-1 Cdc42 effector protein 1 Cell division control protein 42 homolog Cell surface glycoprotein MUC18 Cytoplasmic FMR1-interacting protein DEP domain containing 1B Dedicator of cyto-kinesis 3 Dedicator of cytokinesis 2 Dedicator of cytokinesis 4 Dedicator of cytokinesis 5 Delta(14)-sterol reductase LBR Desmoglein 2 Emerin Engulfment and cell motility 2 Extended synaptotagmin-1 Granule associated Rac and RHOG effector 1 Guanine nucleotide exchange factor DBS IQ motif containing GTPase activating protein 2 Integrin beta-1 Intersectin-1 Kalirin Kinectin 1 LOC687105 protein MAGUK p55 subfamily member 7 MCF.2 cell line derived transforming sequence Membrane-associated progesterone receptor component 2 Mitochondrial proton/calcium exchanger protein Mitogen-activated protein kinase kinase kinase 11 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial Oligophrenin-1 Phosphatidylinositol 3-kinase regulatory subunit alpha Phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1 Phospholipase D1 Pleckstrin homology and RhoGEF domain containing G3 Protein ERGIC-53 Protein diaphanous homolog 3 Proto-oncogene vav RNA binding motif protein 39 Ragulator complex protein LAMTOR1 Ras homolog family member G Ras-related protein Rab-7a Rho GDP dissociation inhibitor beta Rho GDP dissociation inhibitor gamma Rho GDP-dissociation inhibitor 1 Rho GTPase activating protein 1 Rho GTPase activating protein 21 Rho GTPase activating protein 32 Rho GTPase activating protein 5 Rho GTPase-activating protein 35 Rho guanine nucleotide exchange factor 26 Rho guanine nucleotide exchange factor 5 Serine hydroxymethyltransferase Serine/threonine-protein kinase PAK 2 Starch-binding domain-containing protein 1 Synaptobrevin homolog YKT6 Syntaxin-5 Transferrin receptor protein 1 Triple functional domain protein Vang-like protein Vav guanine nucleotide exchange factor 2 Vav guanine nucleotide exchange factor 3 Vesicle-associated membrane protein 3 Vesicle-associated membrane protein-associated protein B non-specific serine/threonine protein kinase non-specific serine/threonine protein kinase receptor protein-tyrosine kinase	A0A0G2JVP1 A0A0G2JYR5 A0A0G2K7N9 A0A8I5ZK89 A0A8I5ZNR8 A0A8I5ZPB5 A0A8I5ZRJ5 A0A8I5ZRT6 A0A8I5ZXI2 A0A8I6A4W2 A0A8I6A9Q4 A0A8I6AEP6 A0A8I6AG90 A0A8I6AM38 A0A8I6GDA1 A0A8I6GLR6 A0A8J8XFB5 A0A8J8XIU8 A1A5P0 B2GUW2 B5DF62 D3ZA21 D3ZBN3 D3ZG43 D3ZKC8 D3ZYG0 D4A1D2 D4A8H8 D4AA32 E9PT59 F1LVW7 F1M0Z1 F1M4N6 F1MAK3 G3V982 P09527 P0CAX5 P26772 P41350 P49134 P54100 P63025 P70496 P81128 P97924 Q08851 Q32PX6 Q4KLN7 Q5EGY4 Q5FVN1 Q5U2Y3 Q5U3Z7 Q5XI73 Q5XIN6 Q5XIU9 Q62902 Q63190 Q63362 Q63406 Q63787 Q64303 Q66HA1 Q6P791 Q7TP65 Q8CFN2 Q99376 Q9EPF2 Q9WVE9 Q9Z1X1 Q9Z269	AABR07021955.1 Ankle2 Arfgap3 Arhgap1 Arhgap21 Arhgap32 Arhgap35 Arhgap5 Arhgdia Arhgdib Arhgdig Arhgef16 Arhgef26 Arhgef5 Borg5 Cav Cav1 Cdc42 Cdc42ep1 Cyfip1 Depdc1b Diaph3 Dock2 Dock3 Dock4 Dock5 Dsg2 Duo Ehsh1 Elmo2 Emd Epha2 Ergic53 Esyt1 Fam62a Garre1 Grlf1 Hapip Hspe1 Iqgap2 Itgb1 Itsn Itsn1 Kalrn Ktn1 LOC687105 Lamtor1 Lbr Lem4 Letm1 Lman1 Map3k11 Mbc2 Mcam Mcf2 Mcf2l Mlk3 Mpp7 Muc18 Ndufa5 Ndufs3 Ophn1 Ost P190A Pak2 Pak4 Pgrmc2 Pik3r1 Pld1 Plekhg3 Prex1 Rab7 Rab7a Rbm39 Rhog Shmt2 Stbd1 Stx5 Stx5a Syb3 Tfrc Trfr Trio Vamp3 Vangl1 Vapb Vav Vav1 Vav2 Vav3 Vrk2 Ykt6 p190ARHOGAP	Rattus norvegicus (Norway rat)
RHOD GTPase cycle	A-kinase anchor protein 12 Alpha-actinin-1 Ankyrin repeat and FYVE domain containing 1 Caveolin-1 Cell surface glycoprotein MUC18 Copine 8 DEP domain containing 1B Delta(14)-sterol reductase LBR EF-hand domain-containing protein D2 Emerin Extended synaptotagmin-1 F-actin-capping protein subunit beta Filamin-A-interacting protein 1 Gamma-adducin Golgin subfamily A member 2 Histidine triad nucleotide binding protein 2 Lamin-B1 Membrane-associated progesterone receptor component 2 Metalloreductase STEAP3 Motile sperm domain containing 2 Phosphatidylinositol 3-kinase regulatory subunit alpha Phosphatidylinositol 3-kinase regulatory subunit beta Plexin A1 Plexin B1 Protein ERGIC-53 Protein diaphanous homolog 1 Protein diaphanous homolog 3 RNA binding motif protein 39 Rac GTPase-activating protein 1 Ras homolog family member D Ras-related protein Rab-7a Rho GTPase activating protein 12 Rho GTPase activating protein 1 Rho GTPase activating protein 21 Rho GTPase activating protein 32 Rho GTPase activating protein 5 Rho GTPase-activating protein 17 Rho GTPase-activating protein 26 Rho GTPase-activating protein 35 Serine/threonine-protein kinase PAK 5 Sodium bicarbonate cotransporter 3 Starch-binding domain-containing protein 1 Torsin-1A-interacting protein 1 Vang-like protein Vesicle-associated membrane protein 3 Vesicle-associated membrane protein-associated protein B WASP homolog associated with actin, golgi membranes and microtubules non-specific serine/threonine protein kinase non-specific serine/threonine protein kinase	A0A0G2JVP1 A0A0G2JYR5 A0A0G2K7N9 A0A0G2K8D1 A0A8I5ZS98 A0A8I6AEP6 A0A8I6AGW9 A0A8I6ALW4 A0A8I6AN18 A0A8I6APL5 A0A8I6GDA1 A0A8I6GKV0 A0A8J8XIU8 B5DEX3 D3ZDX5 D3ZKC8 D3ZKN4 D3ZQ51 D4A280 D4AA32 D4AB01 F1LVW7 F1M775 F1MAK3 P09527 P41350 P63025 P70615 P81128 Q4FZY0 Q5FVN1 Q5PQX1 Q5QD51 Q5RKL5 Q5XI32 Q5XIU9 Q62839 Q62847 Q62902 Q63190 Q63787 Q63788 Q8K4T4 Q99N37 Q9EPF2 Q9R1N3 Q9Z1P2 Q9Z1X1 Q9Z269	AABR07021955.1 Actn1 Add3 Akap12 Ankfy1 Arhgap1 Arhgap12 Arhgap17 Arhgap21 Arhgap26 Arhgap32 Arhgap35 Arhgap5 Capzb Cav Cav1 Cpne8 Depdc1b Diap1 Diaph1 Diaph3 Efhd2 Emd Ergic53 Esyt1 Fam62a Filip1 Golga2 Grlf1 Hint2 Lbr Lman1 Lmnb1 Mbc2 Mcam Mospd2 Muc18 Nbc Nbc2 Nbc3 Nbcn1 P190A Pak5 Pak6 Pak7 Pgrmc2 Pik3r1 Pik3r2 Plxna1 Plxnb1 Rab7 Rab7a Racgap1 Rbm39 Rhod Slc4a7 Stbd1 Steap3 Sws1 Syb3 Tor1aip1 Vamp3 Vangl1 Vapb Vrk2 Whamm p190ARHOGAP	Rattus norvegicus (Norway rat)
Cargo concentration in the ER	Alpha-1-antiproteinase Amphiregulin CD59 glycoprotein Cathepsin Z Coagulation factor VIII Collagen type VII alpha 1 chain Cornichon family AMPA receptor auxiliary protein 1 Dipeptidyl peptidase 1 Folate receptor alpha Glutamate receptor 1 Golgi SNAP receptor complex member 2 Guanine nucleotide-exchange factor SEC12 Lectin, mannose-binding 2 MIA SH3 domain ER export factor 2 MIA SH3 domain ER export factor 3 Multiple coagulation factor deficiency protein 2 homolog Protein ERGIC-53-like Protein ERGIC-53 Protein cornichon homolog 2 Protein cornichon homolog 3 Protein transport protein SEC23 Protransforming growth factor alpha SEC24 homolog A, COPII coat complex component SEC24 homolog B, COPII coat complex component SEC24 homolog C, COPII coat complex component SEC24 homolog D, COPII coat complex component Small COPII coat GTPase SAR1B Syntaxin-5 Transmembrane emp24 domain-containing protein 10 Transmembrane emp24 domain-containing protein 2 Vesicle-trafficking protein SEC22b	A0A0G2JVM2 A0A0G2K112 A0A0G2K626 A0A8I5ZSK4 B5DFC3 D0Q0Y7 D3ZE04 D3ZEB1 D3ZW15 D3ZZA8 F7FPK8 G3V8M6 G3V9S9 O35165 P01134 P17475 P19490 P24338 P27274 P80067 Q08851 Q4KM74 Q5BJU5 Q5FB95 Q5HZY2 Q62902 Q63524 Q63584 Q8K5B3 Q9R1T3 Q9WTV0	Areg Cd59 Cnih1 Cnih2 Cnih3 Col7a1 Ctsc Ctsy Ctsz Ergic53 Ergl F8 Folr1 GluA1 Glur1 Gosr2 Gria1 Gs27 Lman1 Lman1l Lman2 Mcfd2 Mia2 Mia3 Preb Rnp24 Sar1b Sdgf Sdnsf Sec12 Sec22b Sec22l1 Sec23a Sec24a Sec24b Sec24c Sec24d Serpina1 Stx5 Stx5a Tgfa Tmed10 Tmed2 Tmp21	Rattus norvegicus (Norway rat)
Post-translational protein phosphorylation	Ac2-248 Albumin Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A Alpha-1-antiproteinase Alpha-2-HS-glycoprotein Alpha-fetoprotein Ameloblastin Amelogenin, X isoform Amelotin Amyloid beta precursor like protein 2 Amyloid-beta precursor protein Anoctamin Apolipoprotein A-I Apolipoprotein A-II Apolipoprotein A-V Apolipoprotein B-100 Apolipoprotein E Apolipoprotein L 11a Apolipoprotein L 9a Apolipoprotein L, 2 Apolipoprotein L3-like BPI fold containing family B, member 2 Bone morphogenetic protein 15 Bone morphogenetic protein 4 CCN family member 1 Cadherin-2 Ceruloplasmin Chordin-like protein 1 Complement C3 Complement C4 Complement C4B (Chido blood group) Cystatin-C Cytoskeleton-associated protein 4 Dentin matrix acidic phosphoprotein 1 Disintegrin and metalloproteinase domain-containing protein 10 DnaJ homolog subfamily C member 3 Enamelin Endoplasmin FAM20A, golgi associated secretory pathway pseudokinase FAM20C, golgi associated secretory pathway kinase Fibrillin 1 Fibrinogen alpha chain Fibrinogen gamma chain Fibroblast growth factor 23 Fibronectin Follistatin-related protein 1 Follistatin-related protein 3 Galectin-1 Glucosidase 2 subunit beta Glypican-3 Golgi membrane protein 1 Growth arrest-specific protein 6 Heparin cofactor 2 Histidine rich calcium binding protein Insulin-like growth factor binding protein 7 Insulin-like growth factor-binding protein 1 Insulin-like growth factor-binding protein 3 Insulin-like growth factor-binding protein 4 Insulin-like growth factor-binding protein 5 Inter-alpha-trypsin inhibitor heavy chain 2 Interleukin-6 Kinectin 1 Kininogen-1 Lactadherin Latent-transforming growth factor beta-binding protein 1 MIA SH3 domain ER export factor 3 Macrophage colony-stimulating factor 1 Matrilin 3 Matrix extracellular phosphoglycoprotein Matrix remodeling-associated protein 8 Melanotransferrin Membrane-bound transcription factor site-1 protease Menin Mesothelin Metalloproteinase inhibitor 1 Multiple epidermal growth factor-like domains protein 6 Neurosecretory protein VGF Nucleobindin-1 Osteopontin Patatin-like phospholipase domain-containing protein 2 Plasma alpha-L-fucosidase Proenkephalin-A Proprotein convertase subtilisin/kexin type 9 Protein Z-dependent protease inhibitor Protein disulfide-isomerase A6 Protein disulfide-isomerase Reticulocalbin 1 SPARC-like protein 1 Secreted phosphoprotein 24 Secretogranin-1 Secretogranin-2 Secretogranin-3 Serine protease 23 Serotransferrin Similar to apolipoprotein L2; apolipoprotein L-II Stanniocalcin-2 Sulfhydryl oxidase 1 Syndecan-2 Tenascin C Trans-Golgi network integral membrane protein TGN38 Transmembrane protein 132A Uncharacterized LOC108351606 Uncharacterized protein Versican core protein (Fragments) Vitamin K-dependent protein C Wolframin ER transmembrane glycoprotein [Wnt protein] O-palmitoleoyl-L-serine hydrolase von Willebrand factor A domain-containing protein 1	A0A0G2JVM2 A0A0G2JXY3 A0A0G2JYF9 A0A0G2K7F8 A0A8I5ZPY1 A0A8I5ZV45 A0A8I5ZVC4 A0A8I6A4W2 A0A8I6AII9 A0A8I6ARC1 A0A8I6G5V5 A0A8I6GCQ3 B1WC34 D3ZH41 D3ZIB0 D3ZUB0 D3ZXI3 D4A5H4 D4ADK7 E9PT53 E9PTU9 F1M512 F1M9B2 G3V8S6 G3V9M6 I7LRF5 M0RBH1 O35314 O88281 P01026 P02650 P02680 P02770 P02773 P04094 P04638 P04639 P04785 P04937 P06399 P08592 P08649 P08721 P08934 P0C548 P10362 P11762 P12346 P13265 P13635 P14841 P15473 P15943 P17475 P19814 P20156 P20607 P21743 P21744 P24054 P24090 P24594 P30120 P31394 P34900 P47868 P59996 P63278 P70490 P98193 Q00918 Q06826 Q10743 Q3HS82 Q5M854 Q5XI43 Q5XIB6 Q62632 Q62740 Q62840 Q62975 Q63081 Q63083 Q63772 Q64268 Q642A6 Q66HD0 Q6AY61 Q6AYS4 Q6IUU3 Q6MG90 Q76LD0 Q7TMA5 Q7TPI9 Q80WF4 Q8JZQ0 Q8VI82 Q99PW7 Q9ERA7 Q9ERB4 Q9ES02 Q9ES72 Q9QUH3 Q9R0K8 Q9R0T3 Q9WTZ3 Q9WVR8 Q9Z1Y3	2b7 A4 AABR07058479.1 AD1 APPL2 Adam10 Afp Ags Ahsg Alb Ambn Amel Amelx Amgx Amtn Ano8 Aplp2 Apoa1 Apoa2 Apoa5 Apob Apoe Apol11a Apol2 Apol7a Apol7b Apol9a App Atgl Bmp-4 Bmp15 Bmp4 Bpifb2 C3 C4 C4a C4b Cabp1 Ccn1 Cdh2 Chgb Chgc Chrdl1 Ckap4 Cp Csf1 Csfm Cspg2 Cst3 Cyr61 Dmp1 Dnajc3 Dvr-4 Egfl3 Enam Erc Fam20a Fam20c Fbn1 Fetua Fga Fgf23 Fgg Flrg Fn1 Frp Fstl1 Fstl3 Fuca2 Gas6 Gbp Golm1 Gpc3 Grp94 Hcf2 Hrc Hsp90b1 Hspa5bp1 Hspc4 Hspg1 Igfbp-1 Igfbp-3 Igfbp-4 Igfbp-5 Igfbp1 Igfbp10 Igfbp3 Igfbp4 Igfbp5 Igfbp7 Il-6 Il6 Itih2 Kjr Kng Kng1 Ktn1 LOC120093819 LOC503164 Lgals1 Ltbp1 Madm Matn3 Mbtps1 Megf6 Meltf Men1 Mepe Mfge8 Mfi2 Mgat4a Mia3 Mpf Msln Mxra8 Narc1 Ng1 Notum Nuc Nucb1 P4hb P58ipk Pcsk9 Pdia1 Pdia6 Penk Penk-rs Penk1 Pnpla2 Prkcsh Proc Prss23 Qscn6 Qsox1 RGD1309808 Rap3 Rasp1 Rcn1 S1p Sc1 Scg-2 Scg2 Scg3 Sdc2 Serpina1 Serpina10 Serpinc1 Serpind1 Ski1 Sox2 Sparcl1 Spp-1 Spp1 Spp2 Spp24 Stc2 Synd2 Tf Timp-1 Timp1 Tmem132a Tnc Tra1 Ttgn1 Txndc7 Vcan Vgf Vwa1 Wfs1 Zpi	Rattus norvegicus (Norway rat)
Estrogen-dependent gene expression	Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1 Core-binding factor subunit beta Cyclic AMP-dependent transcription factor ATF-2 Cyclin-T1 Cyclin-dependent kinase 9 DNA-directed RNA polymerase II subunit RPB7 DNA-directed RNA polymerase subunit beta DNA-directed RNA polymerase subunit DNA-directed RNA polymerases I, II, and III subunit RPABC1 DNA-directed RNA polymerases I, II, and III subunit RPABC2 DNA-directed RNA polymerases I, II, and III subunit RPABC3 DNA-directed RNA polymerases I, II, and III subunit RPABC5 Estrogen receptor General transcription factor IIF subunit 1 General transcription factor IIF subunit 2 Growth regulating estrogen receptor binding 1 Heat shock protein HSP 90-alpha Heat shock protein HSP 90-beta Hepatocyte nuclear factor 3-alpha Histone H2A type 2-A Histone H2A.J Histone H2A Histone H2A Histone H2A Histone H2A Histone H2A Histone H2A Histone H2B type 1-A Histone H2B Histone H2B Histone H2B Histone H2B Histone H2B Histone H2B Histone H2B Histone H3.1 Histone H3.3 Histone H3 Histone H4 Histone acetyltransferase KAT5 Histone acetyltransferase Histone deacetylase 1 Histone lysine acetyltransferase CREBBP Histone-arginine methyltransferase CARM1 Lysine-specific histone demethylase Nuclear receptor coactivator 3 (Fragment) Nuclear receptor coactivator Nuclear receptor interacting protein 1 Nuclear receptor subfamily 5 group A member 2 POU domain, class 2, transcription factor 1 (Fragment) Peptidyl-prolyl cis-trans isomerase FKBP4 Probable ATP-dependent RNA helicase DDX5 Progesterone receptor Prostaglandin E synthase 3 Protein arginine N-methyltransferase 1 Protein c-Fos RNA polymerase II subunit C RNA polymerase II subunit D RNA polymerase II subunit I RNA polymerase II subunit J Runt-related transcription factor 1 TATA-box-binding protein Transcription factor Jun Transcription factor YY1 Transcription initiation factor IIA subunit 1 Transcription initiation factor IIA subunit 2 Transducin-like enhancer protein 3 Zinc finger protein 217 [histone H3]-trimethyl-L-lysine(9) demethylase histone acetyltransferase	A0A0G2JVK0 A0A0G2JXI9 A0A0G2JXM2 A0A0G2K736 A0A8I5Y222 A0A8I5ZKV9 A0A8I5ZSA8 A0A8I5ZYY0 A0A8I6A2W1 A0A8I6A2X2 A0A8I6A7P3 A0A8I6A9T0 A0A8I6AFW8 A0A8I6APA0 A0A8I6AWT3 A0A8I6AXL7 A0A8I6G641 A0A8I6G659 A0A8I6GMB2 A9UMV8 B0BNE2 D3ZJ08 D3ZQI0 D3ZVK7 D3ZXP3 D4A5A6 D4AB75 D4ACM0 F1LW89 G3V672 G3V8Y5 G3V9C7 M0RB75 M0RBH0 M0RBQ5 M0RCG9 O08949 O08950 O88828 P06211 P0CC09 P12841 P17325 P23512 P31503 P34058 P62489 P62804 P82995 P83868 P84245 Q00729 Q00969 Q01750 Q4AE70 Q4QQW4 Q5EB90 Q63009 Q63046 Q63449 Q641Z4 Q6AY96 Q6JHU9 Q6LED0 Q8CHJ4 Q99MK2 Q9EPU2 Q9JIT3 Q9QVC8 Q9QWM1	AC109542.1 Aib1 Aml1 Atf2 Carm1 Cbfa2 Cbfb Cbp Ccnt1 Cdk9 Cited1 Crebbp Ddx5 ENSRNOG00000062927 ENSRNOG00000064540 ENSRNOG00000066901 ENSRNOG00000068034 Ep300 Esp3 Esr Esr1 Estr Fkbp4 Fkbp52 Fos Foxa1 Greb1 Gtf2a1 Gtf2a2 Gtf2f1 Gtf2f2 H2ab3 H2ac10 H2ac18 H2ac4 H2afb3 H2afx H2aj H2ax H2az2 H2bc1 H2bc12l1 H2bc6 H2bcl1 H2bcl2 H2bu1 H3-3b H3.3b H3c13 H3f3b H4c16 H4c2 H4f16 H4ft Hdac1 Hist1h2ba Hist1h2bc Hist1h2bg Hist1h2bo Hist1h2bq Hist1h4b Hist1h4m Hist2h2aa3 Hist2h3c2 Hist4 Hist4h4 Hnf3a Hrmt1l2 Hsp84 Hsp86 Hsp90aa1 Hsp90ab1 Hspc3 Hspca Hspcb Htatip Jun Kat2b Kat5 Kdm1a Kdm4b LOC100365043 LOC100910200 LOC120097726 LOC120098305 LOC684797 Ncoa1 Ncoa3 Nr3a1 Nr3c3 Nr5a2 Nrip1 Oct-1 Otf-1 Otf1 Pgr Polr2a Polr2b Polr2c Polr2d Polr2e Polr2f Polr2g Polr2i Polr2j Pou2f1 Prmt1 Prmt4 Ptges3 RGD1564091 Rap30 Rjg-9 Runx1 Tbp Tcf-3a Tcf3a Tebp Th2b Tip60 Tip60b Tle3 Yy1 Zfp217 yy1	Rattus norvegicus (Norway rat)
GDP-fucose biosynthesis	Fucose kinase Fucose-1-phosphate guanylyltransferase GDP-L-fucose synthase GDP-mannose 4,6-dehydratase L-fucose mutarotase Solute carrier family 35 member C1	A0A0G2JVI4 A0A0G2K0C0 A0A8I5ZPV8 D3ZWW0 D4ACG8 G3V762	Fcsk Fpgt Fuk Fuom Gfus Gmds Slc35c1 Tsta3	Rattus norvegicus (Norway rat)	G85196CF G96881BQ
RMTs methylate histone arginines	AT-rich interaction domain 1A AT-rich interaction domain 1B Actin-like 6A Actin-like protein 6B Coordinator of PRMT5 and differentiation stimulator Cyclin-dependent kinase 4 DNA (cytosine-5)-methyltransferase 3A G1/S-specific cyclin-D1 Histone H2A type 2-A Histone H2A type 3 Histone H2A.J Histone H2A Histone H2A Histone H2A Histone H3.1 Histone H3 Histone H4 Histone-arginine methyltransferase CARM1 Histone-binding protein RBBP7 Methylosome protein WDR77 Polybromo 1 Protein arginine N-methyltransferase 1 Protein arginine N-methyltransferase 3 Protein arginine N-methyltransferase 5 Protein arginine N-methyltransferase 7 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 Small ribosomal subunit protein uS5 Small ribosomal subunit protein uS5 Transcription activator BRG1 WD repeat-containing protein 5	A0A0G2JVD3 A0A8I5ZMW9 A0A8I5ZQQ2 A0A8I5ZYY0 A0A8I6A5E1 A0A8I6AJE2 A0A8I6AMA8 A0A8I6AWT3 A0A8J8YH81 A9UMV8 D3ZB92 D3ZBS9 D3ZJ08 D3ZT78 D3ZVK7 D4A0E8 E9PTG1 O54772 O70467 P0CC09 P27952 P35426 P39948 P62804 P86173 Q1LZ53 Q498M4 Q4AE70 Q4FZT6 Q4KM87 Q4QR85 Q56A18 Q5U4E8 Q63009 Q6LED0 Q71UF4 Q8K1P7	AABR07029195.1 Actl6a Actl6b Arid1a Arid1b Baf190a Baf57 Baf60b Brg1 Carm1 Ccnd1 Cdk4 Coprs Dnmt3a ENSRNOG00000062927 H2ac10 H2ac18 H2ac25 H2ac4 H2aj H3c13 H4c16 H4c2 H4f16 H4ft Hist1h4b Hist1h4m Hist2h2aa3 Hist2h3c2 Hist3h2a Hist4 Hist4h4 Hrmt1l2 Hrmt1l3 LOC120097726 Mep50 Pbrm1 Prmt1 Prmt3 Prmt4 Prmt5 Prmt7 RGD1565675 Rbbp7 Rps2 Smarca2 Smarca4 Smarcb1 Smarcc1 Smarcc2 Smarcd1 Smarcd2 Smarcd3 Smarce1 Snf2b Snf2l4 Wdr5 Wdr77	Rattus norvegicus (Norway rat)
RUNX1 interacts with co-factors whose precise effect on RUNX1 targets is not known	AT-rich interaction domain 1A AT-rich interaction domain 1B Actin-like 6A Actin-like protein 6B Casein kinase II subunit alpha Casein kinase II subunit alpha Casein kinase II subunit beta Chromobox 2 Chromobox 4 Chromobox 6 Chromobox 8 Core-binding factor subunit beta E3 ubiquitin-protein ligase RING1 E3 ubiquitin-protein ligase RING2 Polybromo 1 Polycomb group ring finger 5 Polyhomeotic homolog 1 Polyhomeotic homolog 2 Polyhomeotic homolog 3 RING1 and YY1 binding protein Runt-related transcription factor 1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 Scm polycomb group protein like 2 Transcription activator BRG1 YY1 associated factor 2 histone acetyltransferase	A0A0G2JVD3 A0A0G2K2B0 A0A8I5Y785 A0A8I5ZMG5 A0A8I5ZMW9 A0A8I5ZQQ2 A0A8I6A5E1 A0A8I6ACN6 A0A8I6AHM8 A0A8I6AJE2 A0A8I6AMA8 A0A8I6ASY1 A0A8I6G641 A0A8I6GMB2 A0A8J8YH81 D3ZBS9 D3ZII7 D3ZRL8 D4A0M3 E9PTG1 F1M771 F7FH41 M0RE14 O54772 P19139 P67874 P86173 Q4KLY4 Q4KM87 Q56A18 Q63046 Q6MGB6 Q8K1P7	Actl6a Actl6b Aml1 Arid1a Arid1b Baf190a Baf57 Baf60b Brg1 Cbfa2 Cbfb Cbx2 Cbx4 Cbx6 Cbx8 Ck2n Csnk2a1 Csnk2a2 Csnk2b Ep300 LOC120102351 Pbrm1 Pcgf5 Phc1 Phc2 Phc3 Ring1 Ring1b Rnf1 Rnf2 Runx1 Rybp Scml2 Smarca2 Smarca4 Smarcb1 Smarcc1 Smarcc2 Smarcd1 Smarcd2 Smarcd3 Smarce1 Snf2b Snf2l4 Yaf2	Rattus norvegicus (Norway rat)
EPH-Ephrin signaling	EPH receptor A10 Ephrin A2 Ephrin A3 Ephrin A4 Ephrin B3 Ephrin type-A receptor 3 Ephrin type-A receptor 5 Ephrin type-A receptor 6 Ephrin type-A receptor 7 Ephrin type-B receptor 1 Ephrin type-B receptor 3 Ephrin type-B receptor 6 Ephrin-A1 Ephrin-A5 Ephrin-B1 receptor protein-tyrosine kinase receptor protein-tyrosine kinase receptor protein-tyrosine kinase receptor protein-tyrosine kinase receptor protein-tyrosine kinase	A0A0G2JV56 D3ZBN3 D3ZDH4 D3ZEN1 D3ZH39 D3ZZK3 F1LX55 F1MA19 F1MAJ0 G3V7D4 M0RDA4 O08680 P09759 P0C0K7 P52796 P54757 P54758 P54759 P97553 P97605	Efna1 Efna2 Efna3 Efna4 Efna5 Efnb1 Efnb3 Ehk-1 Ehk-2 Ehk-3 Ehk2 Ehk3 Ekh1 Elk Epgl1 Epha1 Epha10 Epha2 Epha3 Epha4 Epha5 Epha6 Epha7 Ephb1 Ephb2 Ephb3 Ephb4 Ephb6 Eplg2 Eplg7 Epth2 LOC686310 Lerk1 Lerk2 Lerk7 Rek4 Rek7 Tyro4	Rattus norvegicus (Norway rat)
Signaling by PDGF	Collagen type IV alpha 1 chain Collagen type IV alpha 2 chain Collagen type IV alpha 3 chain Collagen type IV alpha 4 chain Collagen type IV alpha 5 chain Furin Osteopontin Plasminogen Platelet-derived growth factor C Platelet-derived growth factor D Platelet-derived growth factor receptor alpha Platelet-derived growth factor receptor beta Platelet-derived growth factor subunit A Platelet-derived growth factor subunit B (Fragment) Thrombospondin 1 Thrombospondin 2 Thrombospondin 3 Thrombospondin-4 Tissue-type plasminogen activator Tyrosine-protein phosphatase non-receptor type 12	A0A0G2JV24 A0A0G2K742 A0A8I5ZZ86 A0A8I6G4F0 D4A2G6 F1LRJ1 F1M6Q3 F1MA59 G3V7Q4 P08721 P19637 P20786 P23377 P28576 P49744 Q01177 Q05028 Q05030 Q9EQT1 Q9EQX6	2b7 Col4a1 Col4a2 Col4a3 Col4a4 Col4a5 Fur Furin Iegf LOC100911572 Pcsk3 Pdgfa Pdgfb Pdgfc Pdgfd Pdgfr Pdgfr1 Pdgfra Pdgfrb Plat Plg Ptpn12 Rpa1 Scdgf Scdgfb Spp-1 Spp1 Thbs1 Thbs2 Thbs3 Thbs4 Tsp-4 Tsp4	Rattus norvegicus (Norway rat)
Platelet degranulation	ATP-binding cassette subfamily C member 4 Actin, cytoplasmic 2 Actinin alpha 2 Albumin Alpha-1-acid glycoprotein Alpha-1-antiproteinase Alpha-1B-glycoprotein Alpha-2-HS-glycoprotein Alpha-2-macroglobulin Alpha-actinin-1 Alpha-actinin-4 Amyloid beta precursor like protein 2 Amyloid-beta precursor protein Annexin A5 Apolipoprotein A-I Beta-2-glycoprotein 1 Bromodomain and PHD finger containing, 3 C-type lectin domain family 3, member B CD109 molecule CD63 antigen CD9 antigen CYFIP related Rac1 interactor B Calmodulin-3 Chitinase domain-containing protein 1 Clusterin Coagulation factor VIII Coagulation factor XIII A chain Complement factor D Endonuclease domain containing 1 Extracellular matrix protein 1 FERM domain containing kindlin 3 Fibrinogen alpha chain Fibrinogen beta chain Fibrinogen gamma chain Fibronectin Filamin A Fructose-bisphosphate aldolase A GTP binding protein 2 Galectin-3-binding protein Growth arrest-specific protein 6 Hepatocyte growth factor Histidine-rich glycoprotein Hsp90 co-chaperone Cdc37-like 1 Immunoglobulin superfamily containing leucine-rich repeat Insulin-like growth factor I Insulin-like growth factor II Integrin beta-3 Integrin subunit alpha 2b Inter-alpha-trypsin inhibitor heavy chain 4 Inter-alpha-trypsin inhibitor heavy chain H3 Intracellular hyaluronan-binding protein 4 Kininogen-1 LHFPL tetraspan subfamily member 2 Left-right determination factor Left-right determination factor Lymphocyte antigen 6 complex locus protein G6f Lysosome-associated membrane glycoprotein 2 MAGE family member D2 MICOS complex subunit Mesencephalic astrocyte-derived neurotrophic factor Metalloproteinase inhibitor 1 Metalloproteinase inhibitor 3 Multimerin 1 NADH-cytochrome b5 reductase 1 NHL repeat containing 2 Obg-like ATPase 1 P-selectin Pcyox1l protein Phosphatase and actin regulator 2 Plasma protease C1 inhibitor Plasminogen activator inhibitor 1 Plasminogen Platelet endothelial cell adhesion molecule Platelet factor 4 Platelet glycoprotein 4 Platelet-derived growth factor subunit A Platelet-derived growth factor subunit B (Fragment) Pleckstrin Pro-epidermal growth factor Prosaposin Protein FAM3C Protocadherin 7 Ras-related protein Rab-27B Retinoic acid receptor responder protein 2 SPARC Saccharopine dehydrogenase-like oxidoreductase Secreted phosphoprotein 24 Secretogranin-3 Selenoprotein P Serglycin Serotransferrin Serpin family A member 4 Serpin family F member 2 Sulfhydryl oxidase 1 Superoxide dismutase [Cu-Zn] Synaptotagmin-like protein 4 Syntaxin-binding protein 2 Talin 1 Testis expressed 264 Thrombospondin 1 Thymosin beta 4, X-linked Torsin family 4, member A Transforming growth factor beta-1 proprotein Transforming growth factor beta-2 proprotein Transforming growth factor beta-3 proprotein Transgelin-2 Tubulin alpha-4A chain Vascular endothelial growth factor A Vascular endothelial growth factor B Vascular endothelial growth factor C Vascular endothelial growth factor D Vesicle transport through interaction with t-SNAREs homolog 1B Vinculin Vitamin K-dependent protein S WD repeat-containing protein 1 protein disulfide-isomerase	A0A0G2JV24 A0A0G2JXI6 A0A0U1RRW8 A0A8I5Y9A0 A0A8I5ZN92 A0A8I5ZV49 A0A8I5ZZZ2 A0A8I6ABG6 A0A8I6AQI7 A0A8I6AUX5 A0A8I6AUZ6 A0A8I6GGN2 A0A8J8YNE4 A0JPJ7 A0JPQ9 A1L1K8 B1H232 B2GVB9 B5DEI0 D3ZEB1 D3ZG57 D3ZIP8 D3ZLM5 D3ZUU6 D4A0X7 D4A3E0 D4A447 D4A670 D4ABV1 F1M3J4 M0R402 O08619 O35251 O35485 O35757 O70513 P01346 P02680 P02764 P02770 P04639 P04917 P04937 P05065 P05371 P06238 P06399 P06765 P07522 P07632 P08025 P08592 P08934 P0C5H9 P0DP31 P10960 P12346 P14480 P14668 P15943 P16612 P16975 P17046 P17246 P17475 P17945 P20961 P24090 P25236 P26644 P28576 P28648 P30120 P32038 P40241 P47868 P48032 P53813 P58200 P62025 P63259 P85972 P98106 Q01177 Q05028 Q07257 Q07258 Q07969 Q3B7U1 Q3SWT0 Q4KM33 Q5EB81 Q5EBC0 Q5RKI0 Q5UCE3 Q5XFX0 Q5XIC3 Q5XIF6 Q62740 Q62753 Q62894 Q63416 Q63772 Q68HB6 Q6AY30 Q6IUU3 Q6MG56 Q6P734 Q810F4 Q8R2H2 Q8VHQ7 Q99P74 Q99PS8 Q9EPH1 Q9QXQ0 Q9Z1P2	A1bg A2m A2m1 A4 AD1 APPL2 Abcc4 Actg Actg1 Actn1 Actn2 Actn4 Adn Ahsg Alb Aldoa Anx5 Anxa5 Aplp2 Apoa1 Apoh Apool App Armet Brpf3 CaMIII Calm3 Cam3 Camc Cd109 Cd36 Cd63 Cd9 Cdc37l1 Cfd Chid1 Clec3b Clu Cxcl4 Cyb5r1 Cyrib Df Ecm1 Egf Endod1 F13a F13a1 F8 Fam3c Fat Fermt3 Fetua Fga Fgb Fgg Figf Flna Fn1 G6f Gas6 Gtpbp2 Habp4 Hgf Hrg Hrg1 Igf-1 Igf-2 Igf1 Igf2 Ilei Islr Itga2b Itgb3 Itih3 Itih4 Kng Kng1 LOC682714 LOC686539 Lamp-2 Lamp2 Lefty1 Lefty2 Lgals3bp Lhfpl2 Ly6g6f Maged2 Manf Mmrn1 Mrp4 Nhlrc2 Ola1 Orm1 Pai1 Pcdh7 Pcyox1l Pdgfa Pdgfb Pecam Pecam1 Pf4 Pgsg Phactr2 Planh1 Plek Plg Prg Prg1 Pros Pros1 Psap Qscn6 Qsox1 Rab27b Rarres2 Rpa1 Sccpdh Scg3 Scyb4 Selenop Selp Sepp1 Serpina1 Serpina4 Serpine1 Serpinf2 Serping1 Sgp1 Sod1 Sox2 Sparc Spp2 Spp24 Srgn Stxbp2 Sytl4 Tagln2 Tex264 Tf Tgf-b3 Tgfb1 Tgfb2 Tgfb3 Thbs1 Timp-1 Timp-3 Timp1 Timp3 Tln1 Tmsb4x Tmx3 Tor4a Tuba4 Tuba4a Unc18b Vcl Vegf Vegfa Vegfb Vegfc Vegfd Vrf Vti1b Vti1l1 Wdr1	Rattus norvegicus (Norway rat)
Integrin cell surface interactions	Aa1018 Basigin CD44 antigen Cadherin-1 Cartilage oligomeric matrix protein Collagen type IV alpha 1 chain Collagen type IV alpha 2 chain Collagen type IV alpha 3 chain Collagen type IV alpha 4 chain Collagen type XIII alpha 1 chain Collagen type XVI alpha 1 chain Collagen type XVIII alpha 1 chain Fibrillin 1 Fibrinogen alpha chain Fibrinogen beta chain Fibrinogen gamma chain Fibronectin Integrin alpha 3 variant B Integrin alpha-1 Integrin alpha-D Integrin beta-1 Integrin beta-3 Integrin beta-6 Integrin beta Integrin beta Integrin beta Integrin beta Integrin subunit alpha 10 Integrin subunit alpha 11 Integrin subunit alpha 2 Integrin subunit alpha 2b Integrin subunit alpha 4 Integrin subunit alpha 5 Integrin subunit alpha 6 Integrin subunit alpha 8 Integrin subunit alpha 9 Integrin subunit alpha E Integrin subunit alpha L Integrin subunit alpha V Integrin subunit alpha X Integrin-binding sialoprotein Intercellular adhesion molecule 1 Intercellular adhesion molecule 2 Intercellular adhesion molecule 4, Landsteiner-Wiener blood group Intercellular adhesion molecule 5 Junctional adhesion molecule 2 Junctional adhesion molecule A Junctional adhesion molecule C Leukocyte surface antigen CD47 Lumican Mucosal addressin cell adhesion molecule 1 Osteopontin Platelet endothelial cell adhesion molecule Tenascin C Thrombospondin 1 Vascular cell adhesion protein 1	A0A0G2JV24 A0A0G2JVU1 A0A0G2K1E2 A0A0G2K2Q8 A0A0G2K470 A0A0G2K742 A0A8I5ZWP3 A0A8I6AJE9 A0A8I6AQL1 A0A8I6ARC1 A0A8I6GGN2 A0A8I6GLR1 B2RYB8 D3ZMQ3 D3ZN51 D3ZP29 D3ZW82 D4A435 F1LND0 F1LP44 F1LRJ1 F1LUU1 F1LZX9 F1M6Q3 F1MA59 F7F1E3 G3V7M2 G3V9M6 I4DUB5 M0R6T8 O70540 P02680 P04937 P06399 P08721 P13839 P14480 P18614 P26051 P26453 P29534 P35444 P49134 P51886 P97829 Q00238 Q3MHC0 Q3SWT0 Q68FQ2 Q6AXM6 Q6AYF4 Q7TQ11 Q8R2H2 Q9JHY1 Q9QYE7 Q9R0T4	2b7 Bsg Cd44 Cd47 Cdh1 Col13a1 Col16a1 Col18a1 Col4a1 Col4a2 Col4a3 Col4a4 Comp F11r Fbn1 Fga Fgb Fgg Fn1 ITGA3B Ibsp Icam-1 Icam1 Icam2 Icam4 Icam5 Itga1 Itga10 Itga11 Itga2 Itga2b Itga3 Itga4 Itga5 Itga6 Itga8 Itga9 Itgad Itgae Itgal Itgav Itgax Itgb1 Itgb2 Itgb3 Itgb5 Itgb6 Itgb7 Itgb8 Jam1 Jam2 Jam3 LOC100911572 Lcn Ldc Lum Madcam1 Pecam Pecam1 Spp-1 Spp1 Thbs1 Tnc Vcam-1 Vcam1 Vtn	Rattus norvegicus (Norway rat)
Factors involved in megakaryocyte development and platelet production	A-kinase anchor protein 1, mitochondrial A-kinase anchoring protein 10 Capping protein regulator and myosin 1 linker 1 Cbx5 protein Cell division control protein 42 homolog DNA repair protein RAD51 homolog 3 Dedicator of cyto-kinesis 3 Dedicator of cytokinesis 10 Dedicator of cytokinesis 11 Dedicator of cytokinesis 2 Dedicator of cytokinesis 4 Dedicator of cytokinesis 5 Dedicator of cytokinesis 6 Dedicator of cytokinesis 7 Dedicator of cytokinesis 8 EH domain-containing protein 1 EH domain-containing protein 2 EH domain-containing protein 3 Endothelial transcription factor GATA-2 Erythroid transcription factor F-actin-capping protein subunit alpha-1 F-actin-capping protein subunit alpha-2 F-actin-capping protein subunit beta GTP High mobility group 20 B Histone H3.1 Histone H3.3 Histone H3 Histone deacetylase 1 Histone deacetylase 2 Inositol-tetrakisphosphate 1-kinase Jumonji domain containing 1C Lysine-specific histone demethylase MAF bZIP transcription factor F Mitofusin-1 Mitofusin-2 PHD finger protein 21A RAD51 paralog B REST corepressor 1 Rabenosyn, RAB effector Ras-related C3 botulinum toxin substrate 1 Ras-related protein Rab-5A SH2B adapter protein 1 SH2B adapter protein 2 Transcription factor GATA-4 Transcription factor GATA-6 Transcription factor MafG Transcription factor NF-E2 45 kDa subunit Tyrosine-protein kinase JAK2 Vacuolar protein sorting-associated protein 45 Zinc finger protein, multitype 1 Zinc finger protein, multitype 2 cAMP-dependent protein kinase catalytic subunit alpha cAMP-dependent protein kinase catalytic subunit beta cAMP-dependent protein kinase type I-alpha regulatory subunit cAMP-dependent protein kinase type I-beta regulatory subunit cAMP-dependent protein kinase type II-alpha regulatory subunit cAMP-dependent protein kinase type II-beta regulatory subunit	A0A0G2JV16 A0A0G2K3H2 A0A0G2K736 A0A0G2K7L4 A0A8I5ZK89 A0A8I5ZN85 A0A8I5ZNR8 A0A8I5ZRT6 A0A8I5ZYE0 A0A8I6A829 A0A8I6ABZ8 A0A8I6ADN8 A0A8I6AJW0 A0A8I6ANH8 A0A8I6AW56 A0A8I6AXM6 B2GUZ5 B2RYU7 D3ZJ08 D3ZL11 D4A0R1 D4A168 D4A586 F1M4N6 F7ENH8 G3V6U0 M0R3J8 M0RC99 O08700 O88884 P09456 P12368 P12369 P27791 P29411 P43429 P46152 P46153 P68182 P81377 P84245 Q3T1K5 Q4QQW4 Q4V8H8 Q5XI32 Q62689 Q62985 Q641Z6 Q6AYT2 Q6LED0 Q6RUV5 Q76MX4 Q8CFN2 Q8R491 Q8R4Z9 Q8R500 Q924Y4 Q9Z200	Ak3 Ak3l1 Akap Akap1 Akap10 Akl3l Aps Capza1 Capza2 Capzb Carmil1 Cbx5 Cdc42 Dock10 Dock11 Dock2 Dock3 Dock4 Dock5 Dock6 Dock7 Dock8 Ehd1 Ehd2 Ehd3 Fzo1a Fzo1b Gata1 Gata2 Gata4 Gata6 H3-3b H3.3b H3c13 H3f3b Hdac1 Hdac2 Hist2h3c2 Hmg20b Itpk1 Jak2 Jmjd1c Kdm1a Maff Mafg Mfn1 Mfn2 Nfe2 Phf21a Pkacb Prkaca Prkacb Prkar1a Prkar1b Prkar2a Prkar2b Rab5a Rac Rac1 Rad51b Rad51c Rbsn Rcor1 Sh2-b Sh2b1 Sh2b2 Sh2bpsm1 Vps45 Vps45a Zfpm1 Zfpm2 Zfyve20	Rattus norvegicus (Norway rat)
Collagen degradation	5-phosphohydroxy-L-lysine phospho-lyase 72 kDa type IV collagenase Cathepsin B Cathepsin D Cathepsin K Collagen type XIII alpha 1 chain Collagen type XIX alpha 1 chain Collagen type XV alpha 1 chain Collagen type XVIII alpha 1 chain Collagen type XXV alpha 1 chain Collagen type XXVI alpha 1 chain Collagenase 3 (Fragment) Furin Macrophage metalloelastase Matrilysin Matrix metallopeptidase 15 Matrix metallopeptidase 20 Matrix metalloproteinase-14 Matrix metalloproteinase-9 Neutrophil collagenase Similar to Cathepsin L precursor (Major excreted protein) (MEP) Stromelysin-1 Stromelysin-2 Transmembrane serine protease 6 interstitial collagenase trypsin trypsin	A0A0G2JV12 A0A0G2K2Q8 A0A0G2K8N4 A0A8I5ZME9 A0A8I6G6J0 A0A8I6GLR1 A0A8J8XD81 B5DFD5 D3ZCG5 D3ZCQ0 D3ZKC3 D3ZQV0 D3ZXD9 M0RAM0 O35186 O88766 P00787 P03957 P07152 P23097 P23377 P24268 P33436 P50280 P50282 Q10739 Q63341	Col13a1 Col15a1 Col18a1 Col19a1 Col25a1 Col26a1 Cts7l2 Ctsb Ctsd Ctsk Ctsll3 Fur Furin LOC100365995 LOC100909752 LOC103690164 LOC687064 Mmel Mmp-7 Mmp1 Mmp10 Mmp12 Mmp13 Mmp14 Mmp15 Mmp1a Mmp2 Mmp20 Mmp3 Mmp7 Mmp8 Mmp9 Mtmmp Pcsk3 Phykpl Prss3 RGD1308751 Tmprss6 Try4 Try5	Rattus norvegicus (Norway rat)
Assembly of collagen fibrils and other multimeric structures	Cathepsin B Cathepsin S Collagen alpha-1(I) chain Collagen alpha-1(II) chain Collagen alpha-1(III) chain Collagen alpha-1(V) chain Collagen alpha-1(XI) chain Collagen alpha-2(I) chain Collagen type IV alpha 1 chain Collagen type IV alpha 2 chain Collagen type IV alpha 3 chain Collagen type IV alpha 4 chain Collagen type IV alpha 5 chain Collagen type V alpha 2 chain Collagen type V alpha 3 chain Collagen type VIII alpha 1 chain Collagen type VIII alpha 2 chain Collagen type X alpha 1 chain Collagen type XI alpha 2 chain Collagen type XV alpha 1 chain Collagen type XVIII alpha 1 chain Collagenase 3 (Fragment) Matrilysin Matrix metallopeptidase 20 Matrix metalloproteinase-9 Procathepsin L Similar to Cathepsin L precursor (Major excreted protein) (MEP) Stromelysin-1	A0A0G2JV12 A0A0G2K069 A0A0G2K742 A0A0G2K7A5 A0A8I5ZZ86 A0A8I6GLR1 D3ZKC3 D3ZXD9 D4AC70 D4ADG9 F1LQ00 F1LRJ1 F1M6Q3 F1MA59 F7EVZ0 P00787 P02454 P02466 P03957 P05539 P07154 P13941 P20909 P23097 P50280 P50282 Q02765 Q9JI03	Col10a1 Col11a1 Col11a2 Col15a1 Col18a1 Col1a1 Col1a2 Col2a1 Col3a1 Col4a1 Col4a2 Col4a3 Col4a4 Col4a5 Col5a1 Col5a2 Col5a3 Col8a1 Col8a2 Cts7l2 Ctsb Ctsl Ctsl1 Ctsll3 Ctss LOC100909752 LOC100911572 Mmp-7 Mmp13 Mmp20 Mmp3 Mmp7 Mmp9 RGD1308751	Rattus norvegicus (Norway rat)

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